bms_runner: script using BayesTraits to implement methods from 'Constrained models of evolution lead to improved prediction of functional linkage from correlated gain and loss of genes'

This is version 1.4 of bms_runner, released in March 2011 (with an update to the manual in August 2012). bms_runner is a script written by Daniel Barker and Mark Pagel. bms_runner uses the separate program BayesTraits (http://www.evolution.reading.ac.uk) to predict functional links among genes, on the basis of correlated gain and loss of genes from species' genomes. bms_runner accompanies Barker, Meade and Pagel (2007, Bioinformatics 23:14-20, doi:10.1093/bioinformatics/btl558).

Barker, Daniel; Pagel, Mark. (2021). bms_runner: script using BayesTraits to implement methods from 'Constrained models of evolution lead to improved prediction of functional linkage from correlated gain and loss of genes', [software]. University of Edinburgh. School of Biological Sciences. Institute of Evolutionary Biology. https://doi.org/10.7488/ds/3165.