Research output per year
Research output per year
Description
## Access ##
This dataset is held in the Edinburgh DataVault, directly accessible only to authorised University of Edinburgh staff. External users may request access to a copy of the data by contacting the Principal Investigator, Contact Person or Data Manager named on this page. University of Edinburgh users who wish to have direct access should consult the information about retrieving data from the DataVault at: https://www.ed.ac.uk/is/research-support/datavault.
This dataset is held in the Edinburgh DataVault, directly accessible only to authorised University of Edinburgh staff. External users may request access to a copy of the data by contacting the Principal Investigator, Contact Person or Data Manager named on this page. University of Edinburgh users who wish to have direct access should consult the information about retrieving data from the DataVault at: https://www.ed.ac.uk/is/research-support/datavault.
Abstract
This vault contains the data related to the paper Vacante et al, 2021 Circ Res (DOI: 10.1161/CIRCRESAHA.120.318688) – Study of CARMN in CASMC and atherosclerosis
It includes:
# Bulk RNAseq (raw, processed data and differential expression analysis) of CASMC treated with gapCTRL or gapCARMN in different CASMC phenotypes (-/+ PDGF, -/+ migration, -/+ cholesterol/MBCD treatment)
# LongReadSeq_Nanopore.
Long read sequencing was performed in nuclear RNAs from CASMC (run 2 and 3).
# Other characterisation of CARMN locus such as chromatin marks, promoter analysis and conservation.
# ExperimentalData.
Data from human and mouse experiments. Files obtained from Francesca Vacante.
Data should be kept for 10 year after publication (until April 2031) as per funder policy.
It includes:
# Bulk RNAseq (raw, processed data and differential expression analysis) of CASMC treated with gapCTRL or gapCARMN in different CASMC phenotypes (-/+ PDGF, -/+ migration, -/+ cholesterol/MBCD treatment)
# LongReadSeq_Nanopore.
Long read sequencing was performed in nuclear RNAs from CASMC (run 2 and 3).
# Other characterisation of CARMN locus such as chromatin marks, promoter analysis and conservation.
# ExperimentalData.
Data from human and mouse experiments. Files obtained from Francesca Vacante.
Data should be kept for 10 year after publication (until April 2031) as per funder policy.
| Date made available | 1 Mar 2024 |
|---|---|
| Publisher | Edinburgh DataVault |
Research output
- 1 Article
-
CARMN loss regulates smooth muscle cells and accelerates atherosclerosis in mice
Vacante, F., Rodor, J., Lalwani, M., Mahmoud, A., Bennett, M., De Pace, A., Miller, E., van Kuijk, K., de Bruijn, J., Gijbels, M., Williams, T. C., Clark, M., Scanlon, J., Doran, A., Montgomery, R., Newby, D. E., Giacca, M., O'Carroll, D., Hadoke, P. W. F. & Denby, L. & 2 others, , 30 Apr 2021, In: Circulation Research.Research output: Contribution to journal › Article › peer-review
Open AccessFile