Illumina HD genotypes for 3,092 cattle from Burkina Faso, Ghana, Nigeria and Tanzania for: "Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle"

Raw HD data for Riggio et al. 2022: Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle This repository contains the raw Illumina HD genotypes (i.e., 777,962 SNPs) mapped to the bovine UMD3.1 genome assembly for 3,092 animals from four African countries (namely Burkina Faso, Ghana, Nigeria and Tanzania).

Riggio, V., Tijjani, A., Callaby, R., Talenti, A., Wragg, D., Obishakin, E. T., Ezeasor, C., Jongejan, F., Ogo, N. I., Aboagye-Antwi, F., Toure, A., Nzalawahej, J., Diallo, B., Missohou, A., Belem, A. M. G., Djikeng, A., Juleff, N., Fourie, J., Labuschagne, M., … Morrison, L. J. (2022). Illumina HD genotypes for 3,092 cattle from Burkina Faso, Ghana, Nigeria and Tanzania for: "Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle" [Data set]. Zenodo. https://doi.org/10.5281/zenodo.6791394