This dataset is simulated metagenomic data created by Rebecca (Becky) Smith, PhD student at the Roslin Institute in Mick Watson's group. This data is described in detail in Smith et al. 2022, but briefly these reads were simulated using InSilicoSeq (https://doi.org/10.1093/bioinformatics/bty630) with the hiseq exponential model, and 150bp. The genomes used to create this data are from the Hungate Collection (paper at https://www.nature.com/articles/nbt.4110 and sequences at https://genome.jgi.doe.gov/portal/HungateCollection/HungateCollection.info.html ).
Smith, Rebecca; Watson, Mick. (2022). Simulated metagenomic dataset for Smith et al. 2022, [dataset]. University of Edinburgh. The Roslin Institute. https://doi.org/10.7488/ds/3444.
|Date made available||22 Apr 2022|
|Geographical coverage||UNITED KINGDOM,UK|