Variant effect predictions for human, yeast, bacterial and viral proteins

Variant effect predictions made by DEOGEN2, Envision, FATHMM, Fathmm-MKL, FathmmXF, MPC, MutationTaster, MutPred, NetDiseaseSNP, PhD_SNP, PolyPhen2 (HumDiv and HumVar), PonPS, PonP2, PrimateAI, S3D-PROF, SNAP2, SNPs&GO, SNP&GOs3D, SuSPect, VEST4, DeepSequence, fitCons, GenoCanyon, PANTHER, phastCons, PROVEAN, MutationAssessor, BLOSUM62, GERP++, Grantham, LRT, phyloP, SIFT, SIFT4G, SiPhy, CADD, CONDEL, DANN, Eigen, M-CAP, MetaLR, MetaSVM, MVP, PAPI and REVEL. Predictions are made for UBE2I, SUMO1, TPK1, CALM1, BRCA1, P53, HRAS, MAPK1, PTEN, TPMT, ADRB2, HSP82, UBI4, PAB1, GAL4, infA, GmR, bla, ccdB, haeIIIM, Cas9, env, HA-H1N1, HA-H3N2 and PA.

Livesey, Benjamin. (2020). Variant effect predictions for human, yeast, bacterial and viral proteins, [dataset]. MRC Human Genetics Unit. University of Edinburgh. https://doi.org/10.7488/ds/2800.