College of Medicine and Veterinary Medicine

Search results

• Data from: Costs and benefits of sub-lethal Drosophila C virus infection

  Gupta, V. (Creator), Stewart, C. (Creator), Rund, S. S. C. (Creator), Monteith, K. (Creator), Vale, P. (Creator) & Stewart, C. O. (Creator), Dryad, 13 Apr 2017

  DOI: 10.5061/dryad.1k8q4, http://datadryad.org/stash/dataset/doi:10.5061/dryad.1k8q4

  Dataset

• Morphometric data for Edinburgh_NIH10 dataset

  Mikhael, S. (Creator) & Pernet, C. (Creator), Edinburgh DataShare, 1 Jun 2018

  DOI: 10.7488/ds/2357

  Dataset

• A nation-wide retrospective, data-linkage, cohort study of epilepsy and incident dementia - supplement

  Schnier, C. (Creator), Edinburgh DataShare, 14 Feb 2020

  DOI: 10.7488/ds/2770

  Dataset

• Notch signalling mediates secondary senescence- imaging data

  Chandra, T. (Creator) & Rattanavirotkul, N. (Creator), Mendeley, 1 May 2019

  DOI: DOI: 10.17632/y76pb7s8h3.2

  Dataset

• emRiboSeq ribo context analysis

  Reijns, M. (Creator), Taylor, M. (Creator) & Jackson, A. (Creator), Edinburgh DataShare, 9 Dec 2021

  DOI: 10.7488/ds/3252, https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE64521

  Dataset

• Lagging strand replication shapes the mutational landscape of the genome 

  Taylor, M. (Creator), Kemp, H. (Creator), Marion de Proce, S. (Creator), Reijns, M. (Creator), Ding, J. (Creator) & Jackson, A. (Creator), Edinburgh DataShare, 26 Jan 2015

  DOI: 10.7488/ds/204, http://www.sciencemag.org/site/feature/data/raghu1064351/SmoothedPooledHLData/smoothedpooledHLdata.html and 2 more links, http://hgdownload.soe.ucsc.edu/goldenPath/sacCer3/multiz7way/maf/ , ftp://ftp.sanger.ac.uk/pub/users/dmc/yeast/latest/misc.tgz (show fewer)

  Dataset

• Data supporting the paper "From Head to Hind: Elucidating Function through Contrasting Morphometrics of Ancient and Modern Pedigree Dogs". This dataset was previously titled - Geometric Morphometrics in Canine Archaeozoology: Hallmarks of Present-Day Sight Hounds in the Bones of an Ancient Roman Dog

  Schoenebeck, J. (Creator) & Nussbaumer, M. (Creator), Edinburgh DataShare, 28 Feb 2020

  DOI: 10.7488/ds/2538

  Dataset

• RESTART | planned secondary analyses

  Salman, R. (Creator), Edinburgh DataShare, 22 May 2019

  DOI: 10.7488/ds/2551

  Dataset

• "Davies2018_OPEN_DATASET_summary_results.txt" - Data supporting paper Davies et al. "Study of 300,486 individuals identifies 148 independent genetic loci influencing general cognitive function."

  Lam, M. (Creator), Davies, G. (Creator), Lencz, T. (Creator) & Deary, I. (Creator), Edinburgh DataShare, 4 Jun 2019

  DOI: 10.7488/ds/2558

  Dataset

• Comparative analysis of small RNAs released by the filarial nematode Litomosoides sigmodontis in vitro and in vivo

  Quintana, J. (Creator), Buck, A. (Creator), Ivens, A. (Creator) & Kumar, S. (Creator), National Center for Biotechnology Information (Gene Expression Omnibus), 18 Nov 2019

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE140538

  Dataset

• Single-cell transcriptomics uncovers zonation of function in the mesenchyme during liver fibrosis - Seurat objects

  Dobie, R. (Creator), Wilson-Kanamori, J. R. (Creator) & Henderson, N. (Creator), Edinburgh DataShare, 12 Feb 2020

  DOI: 10.7488/ds/2769, https://www.sciencedirect.com/science/article/pii/S2211124719313245

  Dataset

• Risk factors for RSV associated acute lower respiratory infection poor outcome and mortality in young children

  Shi, T. (Depositor), Edinburgh DataShare, 1 Dec 2021

  DOI: 10.7488/ds/2942

  Dataset

• Dense gas flow simulations in ultra-tight confinement

  Sheng, Q. (Creator), Gibelli, L. (Creator), Li, J. (Creator), Borg, M. (Creator) & Zhang, Y. (Creator), Edinburgh DataShare, 10 Aug 2020

  DOI: 10.7488/ds/2896

  Dataset

• Zeng et al 2021 EBiomedicine modifiable POE

  Navarro, P. (Creator), Edinburgh DataVault, 24 Jan 2023

  Dataset

• Spoofing and Anti-Spoofing (SAS) corpus v1.0 

  Wu, Z. (Creator), Khodabakhsh, A. (Creator), Yamagishi, J. (Creator), Saito, D. (Creator), Toda, T. (Creator), Ling, Z. (Creator), King, S. (Creator) & Demiroglu, C. (Creator), Edinburgh DataShare, 27 May 2015

  DOI: 10.7488/ds/252, http://www.zhizheng.org/papers/icassp2015_sas.pdf

  Dataset

• Epigenetic seasonal timing - Le Yu Datasets

  Kuo, R. (Depositor), Smith, J. (Owner), Simpson, C. (Data Manager) & Yu, L. (Creator), Edinburgh DataVault, 2019

  DOI: 10.7488/c19755a2-7306-439c-aaaa-0490136767e1

  Dataset

• Supplementary File 1: Key findings from downloaded COVID-19 information for those categorised as high-risk (20 April 2020)

  McClatchey, K. (Creator), Edinburgh DataShare, 5 Jan 2021

  DOI: 10.7488/ds/2982

  Dataset

• MICA Atherosclerosis RNAseq and PELATON analysis related to Mahmoud et al, 2019 Circ Res and Hung et al, 2020 ATVB (datavault)

  Rodor, J. (Creator), Rodor, J. (Data Manager), Baker, A. (Owner), Pinel, K. (Creator) & Ballantyne, M. (Creator), Edinburgh DataVault, 2 May 2022

  DOI: 10.7488/9a17a8bd-1a48-4cba-99e8-391daf6c4231

  Dataset

• NPQIP final analysis set

  MacLeod, M. (Creator), Figshare, 12 Sept 2017

  DOI: https://doi.org/10.6084/m9.figshare.5375275.v1

  Dataset

• Automatic Speaker Verification Spoofing and Countermeasures Challenge (ASVspoof 2015) Database 

  Wu, Z. (Creator), Kinnunen, T. (Creator), Evans, N. J. (Creator) & Yamagishi, J. (Creator), Edinburgh DataShare, 17 Sept 2015

  DOI: 10.7488/ds/298

  Dataset

• Data from: RAD-Seq derived markers flank the shell colour and banding loci of the Cepaea nemoralis supergene

  Richards, P. M. (Creator), Liu, M. M. (Creator), Lowe, N. (Creator), Davey, J. W. (Creator), Blaxter, M. L. (Creator) & Davison, A. (Creator), Dryad, 23 Jan 2013

  DOI: 10.5061/dryad.560r4, https://datadryad.org/stash/dataset/doi:10.5061/dryad.560r4

  Dataset

• Dataset for "Time-resolved spectral-domain optical coherence tomography with CMOS SPAD sensors"

  Kufcsak, A. (Creator) & Krstajić, N. (Creator), Edinburgh DataShare, 20 Apr 2021

  DOI: 10.7488/ds/3020

  Dataset

• Data from: Determining the phylogenetic and phylogeographic origin of highly pathogenic avian influenza (H7N3) in Mexico

  Lu, L. (Creator), Lycett, S. (Creator) & Leigh-Brown, A. (Creator), Dryad, 26 Aug 2015

  DOI: 10.5061/dryad.j5bf8, https://datadryad.org/stash/dataset/doi:10.5061/dryad.j5bf8

  Dataset

• Capturing free-roaming dogs for sterilisation: data from a multi-site study in Goa, India

  Fielding, H. (Creator), Edinburgh DataShare, 15 Aug 2023

  DOI: 10.7488/ds/7502, https://doi.org/10.1016/j.prevetmed.2023.105996

  Dataset

• hapbin: An efficient program for performing haplotype based scans for positive selection in large genomic datasets

  Prendergast, J. (Creator), Maclean, C. A. (Creator) & Chue Hong, N. (Supervisor), Edinburgh DataShare, 11 Feb 2015

  DOI: 10.7488/ds/214, https://github.com/evotools/hapbin

  Dataset

• The association between respiratory syncytial virus associated acute lower respiratory infection in early life and subsequent recurrent wheeze and asthma in later childhood

  Shi, T. (Depositor), Edinburgh DataShare, 1 Nov 2019

  DOI: 10.7488/ds/2526

  Dataset

• Matlab codes and Data for "Accounting for the Complex Hierarchical Topology of EEG Functional Connectivity in Network Binarisation"

  Smith, K. (Creator), Abasolo, D. (Creator) & Escudero Rodriguez, J. (Creator), Edinburgh DataShare, 2017

  DOI: 10.7488/ds/2109, http://datashare.is.ed.ac.uk/handle/10283/2783

  Dataset

• TST knockout liver proteome iTRAQ and persulfidome

  Morton, N. (Creator), PRIDE database hosted by European Bioinformatics Institute, EBI, 9 Nov 2021

  https://www.ebi.ac.uk/pride/archive and one more link, https://www.ebi.ac.uk/pride/archive/projects/PXD028909 (show fewer)

  Dataset

• DataVault: Experimental data and EndMT bulk RNA-seq related to Monteiro et al, Circ.Res 2021

  Rodor, J. (Creator) & Baker, A. (Owner), Edinburgh DataVault, 6 Jul 2022

  DOI: 10.7488/700791ae-ad2f-4f06-b5e1-43372a6622d9

  Dataset

• DataVault: EndMT scRNAseq - related to Monteiro et al, Circ Res 2021

  Rodor, J. (Creator) & Baker, A. (Owner), Edinburgh DataVault, 6 Jul 2022

  DOI: 10.7488/c99be5e6-15cd-4667-ac44-42adeb2950ca

  Dataset

• Summary GWAS data for morning plasma cortisol from the Cortisol Network (CORNET) Consortium 2014 (n=12,597)

  Walker, B. (Creator) & Bankier, S. (Depositor), Edinburgh DataShare, 10 Aug 2017

  DOI: 10.7488/ds/2986

  Dataset

• Matlab codes for "Amplitude-aware Permutation Entropy: Illustration in Spike Detection and Signal Segmentation"

  Escudero Rodriguez, J. (Creator) & Azami, H. (Creator), Edinburgh DataShare, 26 Mar 2021

  DOI: 10.7488/ds/3008

  Dataset

• Antigenic diversity in Theileria parva populations from cattle and African buffalo analysed using long read sequencing

  Jayaraman, S. (Creator), Morrison, L. (Creator) & Allan, F. (Creator), Edinburgh DataShare, 1 Jun 2021

  DOI: 10.7488/ds/3003

  Dataset

• M cells and the FAE

  Mabbott, N. (Creator), Oxford University Press, 2012

  http://www.roslin.ed.ac.uk/neil-mabbott/m-cells-and-the-fae/

  Dataset

• Carboxy Terminus Heat shock Protein 70 interacting Protein reduces tau-associated degenerative changes 

  Spires-Jones, T. (Creator), Edinburgh DataShare, 4 Sept 2015

  DOI: 10.7488/ds/296

  Dataset

• Spread of tau down neural circuits precedes synapse and neuronal loss in the rTgTauEC mouse model of early Alzheimer’s disease - Data from 2017 Publication

  Spires-Jones, T. (Creator) & Pickett, E. (Creator), Edinburgh DataShare, 6 Feb 2017

  DOI: 10.7488/ds/1706, http://onlinelibrary.wiley.com/doi/10.1002/syn.21965/full

  Dataset

• Synapse loss in the prefrontal cortex is associated with cognitive decline in amyotrophic lateral sclerosis - Array tomography data and Analysis macros

  Spires-Jones, T. (Creator) & Henstridge, C. (Creator), Edinburgh DataShare, 18 Dec 2017

  DOI: 10.7488/ds/2269, https://datashare.is.ed.ac.uk/handle/10283/2974 and one more link, https://datashare.is.ed.ac.uk/handle/10283/2975 (show fewer)

  Dataset

• Post-mortem brain analyses of the Lothian Birth Cohort 1936: Extending lifetime cognitive and brain phenotyping to the level of the synapse: Data set from publication Henstridge et al 2015 Acta Neuropath Comms

  Henstridge, C. (Creator), Jackson, R. (Creator), Kim, J. (Creator), Herrmann, A. (Creator), Wright, A. K. (Creator), Harris, S. (Creator), Bastin, M. (Creator), Starr, J. (Creator), Wardlaw, J. (Creator), Gillingwater, T. (Creator), Smith, C. (Creator), McKenzie, C. (Creator), Cox, S. (Creator), Deary, I. (Creator) & Spires-Jones, T. (Creator), Edinburgh DataShare, 1 Jun 2016

  DOI: 10.7488/ds/1414

  Dataset

• Dementia risk prediction model - definitions of variables

  Wilkinson, T. (Creator), Edinburgh DataShare, 14 May 2020

  DOI: 10.7488/ds/2823

  Dataset

• Image analysis macros for array tomography

  Spires-Jones, T. (Creator), Edinburgh DataShare, 24 Jul 2019

  DOI: 10.7488/ds/2592, https://doi.org/10.1101/393405

  Dataset

• Inhibitory synapse loss and accumulation of amyloid beta in inhibitory presynaptic terminals in Alzheimer’s disease - Kurucu et al

  Spires-Jones, T. (Creator), Edinburgh DataShare, 26 Jul 2021

  DOI: 10.7488/ds/3098, https://doi.org/10.1111/ene.15043

  Dataset

• A general dimension of genetic sharing across diverse cognitive traits inferred from molecular data

  de la Fuente, J. (Creator), Davies, G. (Creator), Grotzinger, A. (Creator), Tucker-Drob, E. (Creator) & Deary, I. (Creator), Edinburgh DataShare, 14 Sept 2020

  DOI: 10.7488/ds/2920

  Dataset

• Data from paper: Reducing voltage-dependent potassium channel Kv3.4 levels ameliorates synapse loss in a mouse model of Alzheimer’s disease

  Spires-Jones, T. (Creator), Edinburgh DataShare, 23 Feb 2022

  DOI: 10.7488/ds/3412, https://doi.org/10.1101/2021.11.24.469829

  Dataset

• Region-specific depletion of synaptic mitochondria in the brains of patients with Alzheimer's disease - TEM data

  Spires-Jones, T. (Creator), Edinburgh DataShare, 17 Aug 2018

  DOI: 10.7488/ds/2417

  Dataset

• Transmembrane protein 97 is a potential synaptic amyloid beta receptor in human Alzheimer’s disease

  Catalano, S. M. (Creator), Dando, O. (Creator), Hamby, M. E. (Creator), Izzo, N. J. (Creator), Smith, C. (Creator), Spires-Jones, T. (Creator), Colom Cadena, M. (Creator), Toombs, J. (Creator), Simzer, E. M. (Creator), Tulloch, J. (Creator), Jackson, R. (Creator), Catterson, J. (Creator), Rose, J. (Creator), Waybright, L. (Creator), Caggiano, A. O. (Creator), Davies, C. (Creator), Hooley, M. (Creator), Dunnett, S. (Creator), Tempelaar, R. (Creator) & Tzioras, M. (Creator), Edinburgh DataShare, 9 Jan 2024

  DOI: 10.7488/ds/7664, https://www.biorxiv.org/content/10.1101/2021.02.01.428238v2

  Dataset

• Data from Paper: Synaptic oligomeric tau in Alzheimer's disease - a potential culprit in the spread of tau pathology through the brain

  Spires-Jones, T. (Creator), Colom Cadena, M. (Creator) & Davies, C. (Creator), Edinburgh DataShare, 12 Apr 2023

  DOI: 10.7488/ds/3837

  Dataset

• Border Collie array data for 58 dogs from Illumina 170k CanineHD BeadChip

  Summers, K. (Creator), Pugh, C. (Creator) & Carlisle, A. (Creator), Edinburgh DataShare, 28 Aug 2018

  DOI: 10.7488/ds/2426

  Dataset

• Transcriptional response of bovine moncocyte-derived macrophages to infection with strains of Mycobacterium bovis and Mycobacterium avium subspecies paratuberculosis

  Glass, E. (Creator), Jensen, K. (Project Member), Gallagher, I. (Project Member), Skuce, R. (Project Member), Welsh, M. (Project Member), Johnston, N. (Researcher) & John, W. (Project Member), National Center for Biotechnology Information (Gene Expression Omnibus), 30 Sept 2017

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE104211

  Dataset

• Supplementary files from manuscript "Limiting pre-menstrual endometrial Hypoxia Inducible Factor 2 Alpha may fine-tune endometrial function at menstruation"

  Maybin, J. (Creator), Rowley, B. (Creator), Carmeliet, P. (Creator), Walker, K. (Creator), Critchley, H. (Creator) & Martinez Aguilar, R. (Creator), Edinburgh DataShare, 22 Nov 2024

  DOI: 10.7488/ds/7798

  Dataset

• Supplementary material - Long-term, dynamic remodelling of the corticotroph transcriptome and excitability after a period of chronic stress

  Nair, S. (Creator), McClafferty, H. (Creator), Shipston, M. (Creator), Duncan, P. (Creator), Le Tissier, P. (Creator) & Romano, N. (Creator), Edinburgh DataShare, 14 Oct 2024

  DOI: 10.7488/ds/7791

  Dataset