Data Science and Artificial Intelligence

Search results

• Synaptic proteome SQLite database

  Sorokina, O. (Creator), Edinburgh DataShare, 9 Apr 2021

  DOI: 10.7488/ds/3017, https://doi.org/10.25493/VA01-BRD

  Dataset

• Metrics for quality control of results from super-resolution machine-learning algorithms – Data extracted from publications in the period 2017- May 2021

  Castorina, L. V. (Creator), Li, B. M. (Creator), Storkey, A. (Creator) & Valdes Hernandez, M. (Creator), Edinburgh DataShare, 24 Jun 2021

  DOI: 10.7488/ds/3062

  Dataset

• PsyVoiD - Investigating the relationship between spontaneous speech features and psychology in the context of the COVID-19 pandemic and lockdown: personality, wellbeing, coping strategies and affect

  De La Fuente Garcia, S. (Creator) & Luz Filho, S. (Creator), Edinburgh DataShare, 24 Oct 2023

  DOI: 10.7488/ds/7532

  Dataset

• Multi-view Disentanglement for Reinforcement Learning with Multiple Cameras

  Dunion, M. (Creator) & Albrecht, S. (Creator), Edinburgh DataShare, 29 Jul 2024

  DOI: 10.7488/ds/7781, https://arxiv.org/abs/2404.14064

  Dataset

• BioNAR: An Integrated Biological Network Analysis Package in Bioconductor

  Sorokina, O. (Creator), Edinburgh DataShare, 8 Feb 2023

  DOI: 10.7488/ds/3803, https://bioconductor.org/packages/release/bioc/html/BioNAR.html

  Dataset

• Single-cell metabolic oscillations are pervasive and may alleviate a proteome constraint

  Swain, P. (Creator), Wongprommoon, A. (Creator), Muñoz González, A. F. (Creator) & Oyarzun, D. (Creator), Edinburgh DataShare, 22 Nov 2024

  DOI: 10.7488/ds/7845

  Dataset

• THE INDO AND ROUNDO DATASETS OF VEHICLE OCCLUSIONS

  Brewitt, C. (Creator), Tamborski, M. (Creator) & Albrecht, S. (Creator), Edinburgh DataShare, 11 Aug 2022

  DOI: 10.7488/ds/3498, https://doi.org/10.48550/arXiv.2206.14163

  Dataset

• Code and data for "Improving the generalization of protein expression models with mechanistic sequence information"

  Shen, Y. (Creator), Kudla, G. (Creator) & Oyarzún, D. (Creator), Zenodo, 6 Jan 2025

  DOI: 10.5281/zenodo.14604309

  Dataset

• REFIT Smart Home dataset

  Firth, S. (Creator), Kane, T. (Creator), Dimitriou, V. (Creator), Hassan, T. (Creator), Fouchal, F. (Creator), Coleman, M. (Creator) & Webb, L. (Creator), Loughborough University, 20 Jun 2017

  DOI: 10.17028/rd.lboro.2070091.v1

  Dataset

• SUPERSEDED - Single-cell metabolic oscillations are pervasive and may alleviate a proteome constraint

  Muñoz González, A. F. (Creator), Wongprommoon, A. (Creator), Oyarzun, D. (Creator) & Swain, P. (Creator), Edinburgh DataShare, 15 Nov 2024

  DOI: 10.7488/ds/7840

  Dataset

• LEEDR project home energy dataset

  Buswell, R. (Creator), Webb, L. (Creator), Cosar-Jorda, P. (Creator), Marini, D. (Creator), Brownlee, S. (Creator), Thomson, M. (Creator), Yang, S.-H. (Creator) & Kalawsky, R. (Creator), Loughborough University, 5 Jul 2018

  DOI: 10.17028/rd.lboro.6176450.v1

  Dataset

• Risk-averse optimization of genetic circuits under uncertainty - Data

  Kobiela, M. (Creator), Oyarzún, D. A. (Creator) & Gutmann, M. U. (Creator), Zenodo, 21 Aug 2024

  DOI: 10.5281/zenodo.13355081, https://zenodo.org/records/13355081

  Dataset

• Learning Complex Teamwork Tasks Using a Given Sub-task Decomposition

  Albrecht, S. (Creator), Fosong, E. (Creator), Rahman, A. (Creator) & Carlucho, I. (Creator), Edinburgh DataShare, 8 May 2024

  DOI: 10.7488/ds/7731, https://arxiv.org/pdf/2302.04944 and one more link, https://github.com/uoe-agents/medoe (show fewer)

  Dataset

• Executable version of Synaptic proteome database paper

  Finke, B. (Creator), Sorokina, O. (Creator) & Armstrong, D. (Creator), Edinburgh DataShare, 30 Aug 2022

  DOI: 10.7488/ds/3516, https://www.nature.com/articles/s41598-021-88945-7 and one more link, http://bioerp-app-erp.apps.hbp.eu/ (show fewer)

  Dataset

• Synaptic Proteome SQLite database V1.00.1

  Sorokina, O. (Creator) & Armstrong, D. (Creator), Edinburgh DataShare, 11 Oct 2022

  DOI: 10.7488/ds/3771

  Dataset

• [CODE] Low-dimensional representations of genome-scale metabolism

  Cain, S. (Creator), Merzbacher, C. (Creator) & Oyarzún, D. (Creator), Zenodo, 4 Jun 2024

  DOI: 10.5281/zenodo.11471995

  Dataset

• 100m resolution travel time to nearest health centre for 54 African Countries

  Watmough, G. (Creator), Seth, S. (Creator), Mlambo, R. (Creator), Mohan, K. (Creator) & Ó Héir, S. (Creator), The University of Edinburgh, 18 Sept 2024

  Dataset

• SpikeInterface Reports datasets

  Buccino, A. P. (Creator), Garcia, S. (Creator), Hurwitz, C. (Creator) & Hennig, M. (Creator), Zenodo, 29 Sept 2020

  DOI: 10.5281/zenodo.4058272

  Dataset

• Code and figures for "Modelling dynamic host-pathway interactions at the genome scale with machine learning"

  Merzbacher, C. (Creator), Oyarzún, D. (Contributor) & Mac Aodha, O. (Contributor), Zenodo, 26 May 2025

  DOI: 10.5281/zenodo.15518931

  Dataset

• SFARI Genes and where to find them; classification modelling to identify genes associated with Autism Spectrum Disorder from RNA-seq data

  Simpson, I. (Creator) & Navarro Torres Arpi, M. (Creator), Edinburgh DataShare, 28 Jan 2021

  DOI: 10.7488/ds/2980

  Dataset

• Processed proteomic and phosphoproteomic timeseries from Ostreococcus tauri, with Gene Ontology enrichment, from "A phospho-dawn of protein modification anticipates light onset in the picoeukaryote O. tauri"

  Hindle, M. M. (Creator), Martin, S. F. (Creator), Noordally, Z. (Creator), Millar, A. (Creator), Simpson, I. (Creator) & Le Bihan, T. (Creator), Zenodo, 16 Mar 2023

  DOI: 10.5281/zenodo.7742118, https://dx.doi.org/10.6019/PXD001735 and 2 more links, https://dx.doi.org/10.6019/PXD001734, https://dx.doi.org/10.6019/PXD002909 (show fewer)

  Dataset

• Circadian rhythms study of the unicellular algae Ostreococcus tauri by shotgun proteomics (LD global proteomics)

  Hindle, M. M. (Creator), Martin, S. F. (Creator), Noordally, Z. (Creator), Millar, A. (Creator), Simpson, I. (Creator) & Le Bihan, T. (Creator), ProteomeXchange, 1 Dec 2022

  DOI: 10.6019/PXD001735, https://doi.org/10.5281/zenodo.7742118 and 2 more links, https://dx.doi.org/10.6019/PXD001734, https://dx.doi.org/10.6019/PXD002909 (show fewer)

  Dataset

• Circadian rhythms study of the unicellular algae Ostreococcus tauri by shotgun proteomics (LD phosphoproteomics)

  Hindle, M. M. (Creator), Martin, S. F. (Creator), Noordally, Z. (Creator), Millar, A. (Creator), Simpson, I. (Creator) & Le Bihan, T. (Creator), ProteomeXchange, 1 Dec 2022

  DOI: 10.6019/PXD001734, https://doi.org/10.5281/zenodo.7742118 and 2 more links, https://dx.doi.org/10.6019/PXD001735, https://dx.doi.org/10.6019/PXD002909 (show fewer)

  Dataset

• Circadian rhythms study of the unicellular algae Ostreococcus tauri by shotgun proteomics (Dark adaptation, global proteomics)

  Hindle, M. M. (Creator), Martin, S. F. (Creator), Noordally, Z. (Creator), Millar, A. (Creator), Simpson, I. (Creator) & Le Bihan, T. (Creator), ProteomeXchange, 1 Dec 2022

  DOI: 10.6019/PXD002909, https://dx.doi.org/10.6019/PXD001735 and 2 more links, https://dx.doi.org/10.6019/PXD001734, https://doi.org/10.5281/zenodo.7742118 (show fewer)

  Dataset

• Persistent animal identification leveraging non-visual markers: Tracking and Identification Dataset - Detections Subset (TIDe-D)

  Williams, C. (Creator), Bains, R. S. (Creator), Zhang, L. (Creator), Zisserman, A. (Creator) & Camilleri, M. (Creator), Edinburgh DataShare, 2 Jun 2023

  DOI: 10.7488/ds/3849, https://github.com/michael-camilleri/TIDe and one more link, https://arxiv.org/abs/2112.06809 (show fewer)

  Dataset

• Raw red counts from a CRISPR screen for host factors required for influenza virus replication

  Clohisey Hendry, S. (Creator), Chia, B. S. (Creator), Wang, B. (Creator), Cui, A. (Creator), Eisenhaure, T. (Creator), Schweitzer, L. D. (Creator), Hoover, P. (Creator), Nachshon, A. (Creator), Smith, N. (Creator), Regan, T. (Creator), Farr, D. (Creator), Gutmann, M. (Creator), Bukhari, S. I. (Creator), Law, A. (Creator), Sangesland, M. (Creator), Gat-Viks, I. (Creator), Digard, P. (Creator), Vasudevan, S. (Creator), Lingwood, D. (Creator), Dockrell, D. (Creator), Doench, J. G. (Creator), Baillie, K. (Creator), Hacohen, N. (Creator), Parkinson, N. J. (Creator) & Li, B. (Creator), Edinburgh DataShare, 14 Oct 2024

  DOI: 10.7488/ds/7818

  Dataset

• [CODE] Code for Chadwick et al. (2022), Neuron.

  Chadwick, A. (Creator), Zenodo, 24 Sept 2022

  DOI: 10.5281/zenodo.7109995

  Dataset

• Congeneric predators fill discrete niches created by the relative abundances of their prey species

  Miller, E. (Creator), Mac Aodha, O. (Creator), Greig, E. (Creator), Bonter, D. (Creator) & Hochachka, W. (Creator), Dryad, 28 Jul 2022

  DOI: 10.5061/dryad.w6m905qs8, https://datadryad.org/dataset/doi:10.5061/dryad.w6m905qs8

  Dataset

• Code and data for "Discovery of senolytics using machine learning"

  Smer-Barreto, V. (Creator), Quintanilla, A. (Creator), Elliot, R. J. R. (Creator), Dawson, J. C. (Creator), Sun, J. (Creator), Lorente-Macías, Á. (Creator), Unciti-Broceta, A. (Creator), Carragher, N. O. (Creator), Acosta, J. C. (Creator) & Oyarzún, D. A. (Creator), Zenodo, 27 Apr 2023

  DOI: 10.5281/zenodo.7870357

  Dataset

• Code and data for "Bayesian optimization for design of multiscale biological circuits"

  Merzbacher, C. (Creator), Oyarzún, D. A. (Creator) & Aodha, O. M. (Creator), Zenodo, 11 May 2023

  DOI: 10.5281/zenodo.7926205

  Dataset

• Global sensitivity analysis for investigation of bacterial physiology in complex media with FBA-PRCC

  Sorokin, A. (Creator) & goryanin, I. (Creator), Zenodo, 6 Mar 2025

  DOI: 10.5281/zenodo.14978097, https://github.com/lptolik/FBA-PRCC

  Dataset

• HEADD: Human Explanations for Autonomous Driving Decisions

  Lucas, C. (Creator), Gyevnar, B. (Creator), Wang, C. (Creator), Cohen, S. (Creator) & Albrecht, S. (Creator), Edinburgh DataShare, 26 Jan 2024

  DOI: 10.7488/ds/7867

  Dataset