Institute of Genetics and Cancer

Search results

• STratifying Resilience and Depression Longitudinally (STRADL): A depression-focused investigation of Generation Scotland, using detailed clinical, cognitive, and neuroimaging assessments

  Adams, M. (Creator), McIntosh, A. (Owner), Hawkins, E. (Data Manager), Habota, T. (Creator), Steele, J. D. (Creator), Whalley, H. (Creator), Porteous, D. (Project Leader), Deary, I. (Project Leader), Murray, A. (Creator) & Campbell, A. (Data Manager), Edinburgh DataVault, 2019

  DOI: 10.7488/8f68f1ae-0329-4b73-b189-c7288ea844d7

  Dataset

• Liz Glass TB_Project

  Glass, E. (Owner), Woolliams, J. (Owner), Bishop, S. (Creator), Wilkinson, S. (Researcher), Bermingham, M. (Researcher), Skuce, R. (Creator), Allen, A. (Creator), Simpson, C. (Depositor) & Glass, E. (Data Manager), Edinburgh DataVault, 2017

  DOI: 10.7488/3a935dd6-b1e3-4150-a32e-d3935e3d6c27

  Dataset

• Liz Glass TB Project Genotyping Results

  Glass, E. (Owner), Woolliams, J. (Owner), Bishop, S. (Creator), Wilkinson, S. (Researcher), Bermingham, M. (Researcher), Skuce, R. (Creator), Allen, A. (Creator) & Simpson, C. (Depositor), Edinburgh DataVault, Aug 2017

  https://doi.org/10.7488/ds/2074 and one more link, http://datadryad.org/resource/doi:10.5061/dryad.519bm (show fewer)

  Dataset

• eHistology Atlas: Plates 30-41 Late Gestation (E13.5 – E17.5)

  Graham, E. (Creator), Moss, J. (Creator), Burton, N. (Creator), Roochun, Y. (Creator), Armit, C. (Creator), Richardson, L. (Creator) & Baldock, R. (Creator), Edinburgh DataShare, 22 Dec 2015

  https://datashare.is.ed.ac.uk/handle/10283/945

  Dataset

• eHistology Atlas: Plates 02-15 Early Gestation (E5.5 – E8.5)

  Graham, E. (Creator), Moss, J. (Creator), Burton, N. (Creator), Roochun, Y. (Creator), Armit, C. (Creator), Richardson, L. (Creator) & Baldock, R. (Creator), Edinburgh DataShare, 21 Jan 2016

  https://datashare.is.ed.ac.uk/handle/10283/943

  Dataset

• eHistology Atlas: Plates 16-29 Mid-Gestation (E8.5 – E13.0)

  Graham, E. (Creator), Moss, J. (Creator), Burton, N. (Creator), Roochun, Y. (Creator), Armit, C. (Creator), Richardson, L. (Creator) & Baldock, R. (Creator), Edinburgh DataShare, 22 Dec 2015

  https://datashare.is.ed.ac.uk/handle/10283/944

  Dataset

• Supplementary files for study on modeling DSB with random forests

  Ballinger, T. (Creator), Edinburgh DataShare, 5 May 2021

  DOI: 10.7488/ds/2365

  Dataset

• Patient derived cancer-associated fibroblasts from non-small cell lung cancer undergo phenotypic drift in culture

  Akram, A. (Creator), Dorward, D. (Creator), Koppensteiner, L. (Creator), O'Connor, R. (Creator), Jones, P. (Creator) & Mathieson, L. (Creator), Edinburgh DataShare, 14 Jan 2025

  DOI: 10.7488/ds/7767

  Dataset

• Nuclear RNA forms an interconnected network of transcription-dependent and tunable microgels

  Michieletto, D. (Creator), Marenda, M. (Creator) & Gilbert, N. (Creator), Edinburgh DataShare, 21 Jun 2024

  DOI: 10.7488/ds/7751

  Dataset

• Early Gestation Embryo Models (E5.5 – E8.5)

  Baldock, R. (Creator), Armit, C. (Creator), Graham, E. (Creator), Moss, J. (Creator), Richardson, L. (Creator), Brune, R. (Creator), Burton, N. (Creator), Hill, B. (Creator), Davidson, D. (Creator) & Lawson, K. A. (Creator), Edinburgh DataShare, 14 Sept 2017

  http://datashare.is.ed.ac.uk/handle/10283/2806

  Dataset

• Mid Gestation Embryo Models (E8.5 – E13.0)

  Baldock, R. (Creator), Graham, E. (Creator), Richardson, L. (Creator), Armit, C. (Creator), Brune, R. (Creator), Moss, J. (Creator), Burton, N. (Creator), Hill, B. (Creator) & Davidson, D. (Creator), Edinburgh DataShare, 18 Sept 2017

  http://datashare.is.ed.ac.uk/handle/10283/2807

  Dataset

• Mutational bias in spermatogonia impacts the anatomy of regulatory sites in the human genome

  Fitzpatrick, D. (Creator), Semple, C. (Creator), Taylor, M. (Creator), Talmane, L. (Creator), Kaiser, V. (Creator), Kumar, Y. (Creator), Semple, F. (Creator) & Maclennan, M. (Creator), Edinburgh DataShare, 7 Jun 2021

  DOI: 10.7488/ds/3053, https://doi.org/10.1101/2021.06.10.447556

  Dataset

• Fossilization processes have little impact on tip-calibrated divergence time analyses

  O'Reilly, J. (Creator), Dryad, 17 Jun 2021

  DOI: 10.5061/dryad.b2rbnzsd4, https://datadryad.org/dataset/doi:10.5061/dryad.b2rbnzsd4

  Dataset

• Late Gestation Embryo Models (E13.5 – E18.5)

  Baldock, R. (Creator), Armit, C. (Creator), Graham, E. (Creator), Richardson, L. (Creator), Moss, J. (Creator), Brune, R. (Creator), Burton, N. (Creator), Hill, B. (Creator), Davidson, D. (Creator), Delaurier, A. (Creator), Mohun, T. J. (Creator), Logan, M. P. (Creator), Ruffins, S. (Creator) & Jacobs, R. E. (Creator), Edinburgh DataShare, 18 Sept 2017

  http://datashare.is.ed.ac.uk/handle/10283/2808

  Dataset

• Lagging strand replication shapes the mutational landscape of the genome 

  Taylor, M. (Creator), Kemp, H. (Creator), Marion de Proce, S. (Creator), Reijns, M. (Creator), Ding, J. (Creator) & Jackson, A. (Creator), Edinburgh DataShare, 26 Jan 2015

  DOI: 10.7488/ds/204, http://www.sciencemag.org/site/feature/data/raghu1064351/SmoothedPooledHLData/smoothedpooledHLdata.html and 2 more links, http://hgdownload.soe.ucsc.edu/goldenPath/sacCer3/multiz7way/maf/ , ftp://ftp.sanger.ac.uk/pub/users/dmc/yeast/latest/misc.tgz (show fewer)

  Dataset

• Imaging Drug Uptake by Bioorthogonal Stimulated Raman Scattering Microscopy

  Tipping, W. (Creator), Lee, M. (Creator), Serrels, A. (Creator), Brunton, V. (Creator) & Hulme, A. (Creator), Edinburgh DataShare, 18 May 2017

  DOI: 10.7488/ds/2046

  Dataset

• Colocalization of corneal resistance factor GWAS loci with GTEx e/sQTLs

  Jiang, X. (Creator), Boutin, T. (Creator) & Vitart, V. (Creator), Zenodo, 2 Aug 2024

  DOI: 10.5281/zenodo.13175662

  Dataset

• A Celebration of Scottish Health Cohort Studies: Participants' attitudes towards data research

  Beange, I. (Creator), McIntosh, A. (Creator), Kirkham, E. (Creator), Fletcher-Watson, S. (Creator), Lawrie, S. (Creator), Batty, G. D. (Creator), Boardman, J. (Creator), Black, C. (Creator) & Porteous, D. (Creator), Edinburgh DataShare, 16 Dec 2019

  DOI: 10.7488/ds/2728

  Dataset

• GWAS summary statistics for uric acid in GS:SFHS

  Marten, J. (Creator), Vitart, V. (Creator) & Hayward, C. (Creator), Edinburgh DataShare, 31 Aug 2017

  DOI: 10.7488/ds/2125

  Dataset

• Data pertaining to publication: Meta-GWAS Reveals Novel Genetic Variants Associated with Urinary Excretion of Uromodulin

  Joseph, C. (Creator) & Hayward, C. (Creator), Edinburgh DataShare, 6 Apr 2021

  DOI: 10.7488/ds/3012

  Dataset

• Segmented Gel Electrophoresis Images used for Training GelGenie Models

  Aquilina, M. (Creator), Wu, N. (Creator), Kwan, K. (Creator), Bušić, F. (Creator), Dodd, J. (Creator), Nicolás-Sáenz, L. (Creator), O'Callaghan, A. (Creator), Bankhead, P. (Creator), Dunn, K. (Creator), Wang, S. S. (Contributor), Zhao, Y. (Contributor), Mayer, T. (Contributor), Cui, H. (Contributor), Reis, J. (Contributor) & Törner, R. (Contributor), Zenodo, 13 Jan 2025

  DOI: 10.5281/zenodo.14641949, https://github.com/mattaq31/GelGenie

  Dataset

• Code and datasets for structural analyses in Natan et al, "Assembly in the translation milieu imposes evolutionary constraints on homomeric proteins"

  Marsh, J. (Creator), Edinburgh DataShare, 10 Oct 2017

  DOI: 10.7488/ds/2227

  Dataset

• [CODE] VallejosGroup/CompRisksVignettes: Final code used in Monterrubio-Gomez et al (2024)

  KarlaMonterrubio (Creator), Vallejos, C. (Creator) & Constantine-Cooke, N. (Creator), Zenodo, 23 Jan 2024

  DOI: 10.5281/zenodo.10554684

  Dataset

• Naturally Inspired Peptide Leads: Alanine Scanning Reveals an Actin-Targeting Thiazole Analogue of Bisebromoamide

  Johnston, H. J. (Creator), Boys, S. K. (Creator), Makda, A. (Creator), Carragher, N. (Creator) & Hulme, A. (Creator), Edinburgh DataShare, 31 Jul 2016

  DOI: 10.7488/ds/1417

  Dataset

• GenomeArtiFinder variant include list

  Taylor, M. (Creator) & Luft, J. (Creator), Edinburgh DataShare, 1 Jul 2020

  DOI: 10.7488/ds/2860

  Dataset

• Data for publication "Deep Learning-Assisted Co-registration of Full-Spectral Autofluorescence Lifetime Microscopic Images with H&E-Stained Histology Images"

  Fernandes, S. (Creator), Williams, G. (Creator), Akram, A. (Creator), Finalyson, N. (Creator) & Wang, Q. (Creator), Edinburgh DataShare, 18 Mar 2022

  DOI: 10.7488/ds/3421, https://arxiv.org/abs/2202.07755

  Dataset

• Notch signalling mediates secondary senescence- imaging data

  Chandra, T. (Creator) & Rattanavirotkul, N. (Creator), Mendeley, 1 May 2019

  DOI: DOI: 10.17632/y76pb7s8h3.2

  Dataset

• eHistology Atlas: Plates S1-S6 Coronal Supplement (E11.5-E15.5)

  Graham, E. (Creator), Moss, J. (Creator), Burton, N. (Creator), Roochun, Y. (Creator), Armit, C. (Creator), Richardson, L. (Creator) & Baldock, R. (Creator), Edinburgh DataShare, 19 Dec 2016

  https://datashare.is.ed.ac.uk/handle/10283/2198 and one more link, http://www.emouseatlas.org/emap/eHistology/supplement (show fewer)

  Dataset

• Dataset pertaining to the publication “Loci Associated with N-Glycosylation of Human Immunoglobulin G Show Pleiotropy with Autoimmune Diseases and Haematological Cancers”

  Huffman, J. E. (Creator) & Hayward, C. (Creator), Edinburgh DataShare, 12 Apr 2016

  DOI: 10.7488/ds/1370

  Dataset

• Insights into the genetic basis of retinal detachment

  Boutin, T. (Creator) & Vitart, V. (Creator), Edinburgh DataShare, 10 Dec 2019

  DOI: 10.7488/ds/2712, https://doi.org/10.1093/hmg/ddz294

  Dataset

• Zeng et al 2021 EBiomedicine modifiable POE

  Navarro, P. (Creator), Edinburgh DataVault, 24 Jan 2023

  Dataset

• Nanostring data Robertson et al. re interaction between FOXG1 and Wnt/ß-catenin signalling

  Robertson, F. (Creator), Edinburgh DataShare, 7 Apr 2023

  DOI: 10.7488/ds/3835

  Dataset

• Supplementary Files for Re-Generating Manual Analyses in 'GelGenie: an AI-powered framework for gel electrophoresis image analysis'

  Aquilina, M. (Creator), Wu, N. (Creator), Kwan, K. (Creator), Bušić, F. (Creator), Dodd, J. (Creator), Nicolás-Sáenz, L. (Creator), O'Callaghan, A. (Creator), Bankhead, P. (Creator) & Dunn, K. (Creator), Zenodo, 6 Feb 2025

  DOI: 10.5281/zenodo.14827469

  Dataset

• Dataset pertaining to the publication "Increased Level of Linkage Disequilibrium in Rural Compared with Urban Communities"

  Vitart, V. (Creator), Edinburgh DataShare, 5 Aug 2016

  DOI: 10.7488/ds/1456

  Dataset

• TestEd Survey of Staff and Student Experiences and Perceptions of Novel Covid-19 Testing Platform

  Aitman, T. (Creator), Stagg, H. (Creator), Connolly, R. (Creator), Baxter, M. S. (Creator), Morlet Corti, Y. (Creator), Bauld, L. (Creator), Street, A. (Creator) & Christison, S. (Creator), Edinburgh DataShare, 1 Feb 2023

  DOI: 10.7488/ds/3802

  Dataset

• Modulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans 

  Vitart, V. (Creator), Edinburgh DataShare, 4 Feb 2015

  DOI: 10.7488/ds/212

  Dataset

• Data supporting Luciano et al. The influence of X chromosome variants on trait neuroticism.

  McIntosh, A. (Creator), Davies, G. (Creator), Luciano, M. (Creator), Summers, K. (Creator), Hill, D. (Creator), Hayward, C. (Creator), Liewald, D. (Creator), Porteous, D. (Creator) & Gale, C. (Creator), Edinburgh DataShare, 4 Jun 2019

  DOI: 10.7488/ds/2566

  Dataset

• DNA methylation is a key determinant of response to targeted and immune checkpoint therapies in metastatic renal cell carcinoma

  Jeanneret, F. (Creator), Schoch, S. (Creator), Ballester, P. (Creator), Symeonides, S. N. (Creator), Laird, A. (Creator), Axelson, H. (Creator), PFLIEGER, D. (Creator) & Battail, C. (Creator), Zenodo, 19 Mar 2025

  DOI: 10.5281/zenodo.15052574

  Dataset

• Data from: The translational landscape of the splicing factor SRSF1 and its role in mitosis

  Maslon, M. M. (Creator), Heras, S. R. (Creator), Bellora, N. (Creator), Eyras, E. (Creator) & Cáceres, J. F. (Creator), Dryad, 5 May 2015

  DOI: 10.5061/dryad.5sv39

  Dataset

• Mix and Match: Mono-substituted Hydrocarbon Diastereomer Combinations Reveal Stapled Peptides with High Structural Fidelity

  McWhinnie, F. (Creator), Sepp, K. (Creator), Kunath, T. (Creator), Houston, D. (Creator), Hupp, T. (Creator) & Hulme, A. (Creator), Edinburgh DataShare, 22 Dec 2017

  DOI: 10.7488/ds/2276

  Dataset

• A genome-wide screen in human embryonic stem cells reveals novel sites of allele-specific histone modification associated with known disease loci 

  Prendergast, J. (Creator), Tong, P. (Creator), Hay, D. (Creator), Farrington, S. (Creator) & Semple, C. (Creator), Edinburgh DataShare, 31 Oct 2012

  DOI: 10.7488/ds/147, http://www.epigeneticsandchromatin.com/content/5/1/6 and one more link, http://www.epigeneticsandchromatin.com/content/5/1/6/additional (show fewer)

  Dataset

• Data from the study "Fine-mapping host genetic variation underlying outcomes to Mycobacterium bovis infection in dairy cows"

  Wilkinson, S. (Creator), Bishop, S. (Creator), Allen, A. R. (Creator), McBride, S. (Creator), Skuce, R. (Creator), Bermingham, M. (Creator), Woolliams, J. (Creator) & Glass, E. (Creator), Edinburgh DataShare, 27 Jun 2017

  DOI: 10.7488/ds/2074

  Dataset

• Genome-wide pleiotropy and shared biological pathways for resistance to bovine pathogens

  Haley, C. (Creator), Mahmoud, M. (Creator) & König, S. (Creator), Edinburgh DataShare, 7 Mar 2018

  DOI: 10.7488/ds/2318

  Dataset

• Datasets for Low-Cost High Sensitivity Pulsed Endomicroscopy to Visualize Tri-Color Optical Signatures

  Mills, B. (Creator), Murray, I. (Creator), Marshall, A. (Creator), Craven, T. (Creator), Emanuel, P. (Creator), Choudhary, T. (Creator), Norberg, D. (Creator), Scholefield, E. (Creator), Akram, A. (Creator), Davie, A. (Creator), Hirani, N. (Creator), Bruce, A. (Creator), Moore, A. (Creator), Bradley, M. (Creator), Dhaliwal, K. (Creator) & Krstajic, N. (Creator), Edinburgh DataShare, 1 Jul 2018

  DOI: 10.7488/ds/2355

  Dataset

• Single cell transcriptional profiling of rat embryonic stem cells defined by Rex1-EGFP reporter expression

  Meek, S. (Creator), Chandra, T. (Creator), Joshi, A. (Creator) & Burdon, T. (Creator), Edinburgh DataShare, 1 Nov 2019

  DOI: 10.7488/ds/2639

  Dataset

• Primary Dataset of Single cell transcriptional profiling of rat embryonic stem cells defined by Rex1-EGFP reporter expression

  Burdon, T. (Creator), Meek, S. (Creator), Chandra, T. (Creator), Joshi, A. (Creator) & Simpson, C. (Data Manager), Edinburgh DataVault, 2020

  DOI: 10.7488/078deee1-6e1e-4bae-a483-4ec093ec126f

  Dataset

• Data from: Contrasting drivers of reproductive ageing in albatrosses

  Froy, H. (Creator), Lewis, S. (Creator), Nussey, D. H. (Creator), Wood, A. G. (Creator) & Phillips, R. A. (Creator), Dryad, 16 Jun 2017

  DOI: 10.5061/dryad.hm7k5, https://zenodo.org/records/5017630

  Dataset

• Data from: Faster-X Effects in two Drosophila lineages

  Ávila, V. (Creator), Marion De Procé, S. (Creator), Campos, J. L. (Creator), Borthwick, H. (Creator), Charlesworth, B. (Creator) & Betancourt, A. J. (Creator), Dryad, 28 Oct 2014

  DOI: 10.5061/dryad.3hh83, https://datadryad.org/dataset/doi:10.5061/dryad.3hh83 and one more link, https://zenodo.org/records/4955555 (show fewer)

  Dataset

• Data from: Out of the Andes: patterns of diversification in clearwing butterflies

  Elias, M. (Creator), Joron, M. (Creator), Willmott, K. (Creator), Kaiser, V. (Creator), Silva-Brandão, K. (Creator), Arias, C. (Creator), Gomez Piñeres, L. M. (Creator), Uribe, S. (Creator), Brower, A. (Creator), Freitas, A. (Creator) & Jiggins, C. (Creator), Dryad, 25 Jun 2010

  DOI: 10.5061/dryad.1705, https://zenodo.org/records/5004096

  Dataset

• Code and data for "Improving the generalization of protein expression models with mechanistic sequence information"

  Shen, Y. (Creator), Kudla, G. (Creator) & Oyarzún, D. (Creator), Zenodo, 6 Jan 2025

  DOI: 10.5281/zenodo.14604309

  Dataset