Alastair Hume

MR.

Principal Architect, College of Science and Engineering
Edinburgh Parallel Computing Centre

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16 Conference contribution
5 Article
3 Paper
2 Chapter
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A multi-model Framework for the Arabidopsis life cycle
Zardilis, A., Hume, A. & Millar, A., 19 Feb 2019, In: Journal of Experimental Botany. 70, 9, p. 2463–2477 16 p.
Research output: Contribution to journal › Article › peer-review

Open Access
File
Practical steps to digital organism models, from laboratory model species to ‘Crops in silico’
Millar, A. J., Urquiza Garcia, J., Freeman, P., Hume, A., Plotkin, G. D., Sorokina, O., Zardilis, A. & Zielinski, T., 15 Apr 2019, In: Journal of Experimental Botany. 70, 9, p. 2403–2418 16 p., JEXBOT/2018/235879.
Research output: Contribution to journal › Review article › peer-review

Open Access
File
pyNMMSO, a python implementation of the Niching Migratory Multi-Swarm Optimiser
Hume, A., Wood, C. & Millar, A. J., 24 Dec 2019
Research output: Non-textual form › Software
A multi-model Framework for the Arabidopsis life cycle
Zardilis, A., Hume, A. & Millar, A., 29 Jun 2018, Cold Spring Harbor: bioRxiv, at Cold Spring Harbor Laboratory.
Research output: Working paper

Open Access
Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure
Flis, A., Fernández, A. P., Zielinski, T., Mengin, V., Sulpice, R., Stratford, K., Hume, A., Pokhilko, A., Southern, M. M., Seaton, D. D., McWatters, H. G., Stitt, M., Halliday, K. J. & Millar, A. J., 14 Oct 2015, In: Open Biology. 5, 10, 150042.
Research output: Contribution to journal › Article › peer-review

Open Access
File

1 Invited talk
1 Oral presentation

Talk and demo at GARNet meeting: Being more Open by Being more Productive: shared infrastructure with domain-specific tools
Andrew Millar (Speaker), Tomasz Zielinski (Contributor), Eilidh Troup (Contributor) & Alastair Hume (Contributor)
18 Sep 2018
Activity: Academic talk or presentation types › Oral presentation
ASA2018 talk: Forging a Causal Chain Around the Circadian Clock, from Genome Sequence to Field Traits
Andrew Millar (Invited speaker), Argyris Zardilis (Contributor), Jose Urquiza Garcia (Contributor), Alastair Hume (Contributor), Robert Muetzelfeldt (Contributor) & Gordon Plotkin (Contributor)
5 Nov 2018
Activity: Academic talk or presentation types › Invited talk

1 Finished

The Parameter Optimisation Problem: Addressing a Key Challenge in Computational Systems Biology
Hume, A. & Millar, A.
EPSRC
1/06/16 → 31/03/20
Project: Research