Research output per year
Research output per year
Personal profile
Biography
I am a Postdoctoral researcher funded by:
- COMPARE: COllaborative Management Platform for detection and Analyses of (Re-)emerging and foodborne outbreaks in Europe project
- Selection and Transmission of Antimicrobial Resistance in Complex Systems project and
- Global Surveillance of Antimicrobial Resistance project.
My research focuses on the flow of antibiotic resistance genes between different reservoirs using mathematical models and Next Generation Sequencing. I am particular interested in the use of new techniques and technology to gain knowledge on the temporal and spatial spread of antibiotic resistance on all scales.
Using a combination of (experimental) data, mathematical modelling and whole genome sequencing data, I hope to gain better understanding of, and insight in, the mechanisms that underlie (both spatial and temporal) spread of diseases.
I received my MSc in Biology from the University of Groningen, The Netherlands, after which I started as a PhD-student at the department of Quantitative Veterinary Epidemiology of Wageningen University and Central Veterinary Institute in Lelystad, where I researched the spread of pathogen between spatially separated hosts.
Current Research Interests
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Research students
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Distinctive hospital and community resistomes in Scottish urban wastewater: Metagenomics of a paired wastewater sampling design
Lepper, H. C., Perry, M. R., Wee, B. A., Wills, D., Nielsen, H., Otani, S., Simon, M., Aarestrup, F. M., Woolhouse, M. E. J. & van Bunnik, B. A. D., 1 Dec 2023, In: Science of the Total Environment. 902, p. 1-50 50 p., 165978.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Genomic epidemiology of Escherichia coli: Antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya
Muloi, D. M., Hassell, J. M., Wee, B. A., Ward, M. J., Bettridge, J. M., Kivali, V., Kiyong’a, A., Ndinda, C., Gitahi, N., Ouko, T., Imboma, T., Akoko, J., Murungi, M. K., Njoroge, S. M., Muinde, P., Alumasa, L., Kaitho, T., Amanya, F., Ogendo, A., van Bunnik, B. A. D., & 7 others, 8 Dec 2022, In: BMC Medicine. 20, 1, 471.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance
Munk, P., Brinch, C., Møller, F. D., Petersen, T. N., Hendriksen, R. S., Seyfarth, A. M., Kjeldgaard, J., Svendsen, C. A., van Bunnik, B. A. D., Berglund, F., Global Sewage Surveillance project consortium, Larsson, D. G. J., Koopmans, M. P. G., Woolhouse, M. & Aarestrup, F. M., 1 Dec 2022, In: Nature Communications. 13, 16 p., 7251 .Research output: Contribution to journal › Article › peer-review
Open AccessFile -
The role of the environment in dynamics of antibiotic resistance in humans and animals: A modelling study
Lepper, H., Woolhouse, M. & Bunnik, B. V., 5 Oct 2022, In: Antibiotics. 11, 10, 14 p., 1361.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Secrets of the hospital underbelly: patterns of abundance of antimicrobial resistance genes in hospital wastewater vary by specific antimicrobial and bacterial family
Perry, M., Lepper, H., McNally, L., Wee, B. A., Munk, P., Warr, A., Moore, B., Kalima, P., Philip, C., Husman, A. M. D. R., Aarestrup, F. M., Woolhouse, M. & van Bunnik, B. A. D., 10 Sept 2021, (E-pub ahead of print) In: Frontiers in Microbiology.Research output: Contribution to journal › Article › peer-review
Open AccessFile
Datasets
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Data from: Modelling the impact of curtailing antibiotic usage in food animals on antibiotic resistance in humans
van Bunnik, B. (Creator) & Woolhouse, M. (Creator), Dryad, 7 Mar 2017
DOI: 10.5061/dryad.1g98m, http://datadryad.org/stash/dataset/doi:10.5061/dryad.1g98m
Dataset