Research output per year
Research output per year
- 24 results
Search results
-
2024
PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testing and training
Griffiths, E. J., Mendes, I., Maguire, F., Guthrie, J. L., Wee, B. A., Schmedes, S., Holt, K., Yadav, C., Cameron, R., Barclay, C., Dooley, D., MacCannell, D., Chindelevitch, L., Karsch-Mizrachi, I., Waheed, Z., Katz, L., Petit Iii, R., Dave, M., Oluniyi, P., Nasar, M. I., & 3 others, 11 Jun 2024, (E-pub ahead of print) In: Microbial Genomics. 10, 6, p. 1-12 12 p.Research output: Contribution to journal › Article › peer-review
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HtrA, fatty acids, and membrane protein interplay in Chlamydia trachomatis to impact stress response and trigger early cellular exit
Strange, N., Luu, L., Ong, V., Wee, B. A., Phillips, M. J. A., McCaughey, L., Steele, J. R., Barlow, C. K., Cranfield, C. G., Myers, G., Mazraani, R., Rock, C., Timms, P. & Huston, W. M., 18 Apr 2024, In: Journal of Bacteriology. 206, 4, p. 1-21 21 p., e0037123.Research output: Contribution to journal › Article › peer-review
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2023
Distinctive hospital and community resistomes in Scottish urban wastewater: Metagenomics of a paired wastewater sampling design
Lepper, H. C., Perry, M. R., Wee, B. A., Wills, D., Nielsen, H., Otani, S., Simon, M., Aarestrup, F. M., Woolhouse, M. E. J. & van Bunnik, B. A. D., 1 Dec 2023, In: Science of the Total Environment. 902, p. 1-50 50 p., 165978.Research output: Contribution to journal › Article › peer-review
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A Digital One Health framework to integrate data for public health decision-making
Redman-White, C., Loosli, K., Qarkaxhija, V., Lee, T., Mboowa, G., Wee, B. A. & Muwonge, A., 8 Nov 2023, (E-pub ahead of print) In: The International Journal of Infectious Diseases- One Health. p. 1-6 6 p.Research output: Contribution to journal › Article › peer-review
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Phylogenetic relationship and virulence composition of Escherichia coli O26:H11 cattle and human strain collections in Scotland; 2002-2020
Hoyle, D., Wee, B. A., Macleod, K., Chase-Topping, M., Bease, A., Tongue, S. C., Gally, D., Delannoy, S., Fach, P., Pearce, M. C., Gunn, G. J., Holmes, A. & Allison, L., 6 Nov 2023, (E-pub ahead of print) In: Frontiers in Microbiology. 14, p. 1-18 18 p., 1260422.Research output: Contribution to journal › Article › peer-review
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Rapid metagenomic sequencing for diagnosis and antimicrobial sensitivity prediction of canine bacterial infections
Ring, N., Low, A., Wee, B. A., Paterson, G., Nuttall, T., Gally, D., Mellanby, R. & Fitzgerald, R., 20 Jul 2023, (E-pub ahead of print) In: Microbial Genomics. 9, 7, p. 1-18 18 p.Research output: Contribution to journal › Article › peer-review
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An open-source digital contact tracing system tailored to haulage
Muwonge, A., Wee, B. A., Mugerwa, I., Nabunya, E., Mpyangu, C. M., Bronsvoort, M., Ssebaggala, E. R., Kiayias, A., Mwaka, E. S. & Joloba, M. L., 19 Jul 2023, (E-pub ahead of print) In: Frontiers in Digital Health. 5, p. 1-14 13 p.Research output: Contribution to journal › Article › peer-review
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Epidemiological connectivity between humans and animals across an urban landscape
Hassell, J. M., Muloi, D., VanderWaal, K. L., Ward, M. J., Bettridge, J., Gitahi, N., Ouko, T., Imboma, T., Akoko, J., Karani, M., Muinde, P., Nakamura, Y., Alumasa, L., Furmaga, E., Kaitho, T., Amanya, F., Ogendo, A., Fava, F., Wee, B. A., Phan, H., & 7 others, 14 Jul 2023, In: Proceedings of the National Academy of Sciences (PNAS). 120, 29, 12 p., 2218860120.Research output: Contribution to journal › Article › peer-review
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2022
Genomic epidemiology of Escherichia coli: Antimicrobial resistance through a One Health lens in sympatric humans, livestock and peri-domestic wildlife in Nairobi, Kenya
Muloi, D. M., Hassell, J. M., Wee, B. A., Ward, M. J., Bettridge, J. M., Kivali, V., Kiyong’a, A., Ndinda, C., Gitahi, N., Ouko, T., Imboma, T., Akoko, J., Murungi, M. K., Njoroge, S. M., Muinde, P., Alumasa, L., Kaitho, T., Amanya, F., Ogendo, A., van Bunnik, B. A. D., & 7 others, 8 Dec 2022, In: BMC Medicine. 20, 1, 471.Research output: Contribution to journal › Article › peer-review
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Epidemiological analysis of Legionnaires’ disease in Scotland: a genomic study
Gorzynski, J., Wee, B. A., Llano, M., Alves, J., Cameron, R. L., McMenamin, J., Smith, A., Lindsay, D. & Fitzgerald, R., 11 Oct 2022, (E-pub ahead of print) In: The Lancet Microbe. 3, p. e835–45Research output: Contribution to journal › Article › peer-review
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Population genomics of Escherichia coli in livestock-keeping households across a rapidly developing urban landscape
Muloi, D., Wee, B. A., Mcclean, D., Ward, M., Pankhurst, L., Phan, H., Ivens, A., Kivali, V., Kiyonga, A., Ndinda, C., Gitahi, N., Ouko, T., Hassell, J. M., Imboma, T., Akoko, J., Murungi, M. K., Njoroge, S. M., Muinde, P., Nakamura, Y., Alumasa, L., & 17 others, 14 Mar 2022, In: Nature Microbiology. 7, 4, p. 581-589Research output: Contribution to journal › Article › peer-review
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2021
Population analysis of Legionella pneumophila reveals a basis for resistance to complement-mediated killing
Wee, B. A., Alves, J., Lindsay, D. S. J., Klatt, A-B., Sargison, F. A., Cameron, R. L., Pickering, A., Gorzynski, J., Corander, J., Marttinen, P., Opitz, B., Smith, A. J. & Fitzgerald, J. R., 9 Dec 2021, In: Nature Communications. 12, 1, 7165.Research output: Contribution to journal › Article › peer-review
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Secrets of the hospital underbelly: patterns of abundance of antimicrobial resistance genes in hospital wastewater vary by specific antimicrobial and bacterial family
Perry, M., Lepper, H., McNally, L., Wee, B. A., Munk, P., Warr, A., Moore, B., Kalima, P., Philip, C., Husman, A. M. D. R., Aarestrup, F. M., Woolhouse, M. & van Bunnik, B. A. D., 10 Sept 2021, (E-pub ahead of print) In: Frontiers in Microbiology.Research output: Contribution to journal › Article › peer-review
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Evolutionary and functional analysis of coagulase-positivity among the Staphylococci
Pickering, A., Yebra, G., Gong, X., Goncheva, M., Wee, B. A., Macfadyen, A., Muehlbauer, L. F., Alves, J., Cartwright, R., Paterson, G. & Fitzgerald, R., 4 Aug 2021, (E-pub ahead of print) In: mSphere. e0038121.Research output: Contribution to journal › Article › peer-review
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Radical genome remodelling accompanied the emergence of a novel host-restricted bacterial pathogen
Yebra, G., Haag, A. F., Neamah, M. M., Wee, B. A., Richardson, E. J., Horcajo, P., Granneman, S., Tormo-Más, M. Á., de la Fuente, R., Fitzgerald, J. R. & Penadés, J. R., 20 May 2021, (E-pub ahead of print) In: PLoS Pathogens. 17, 5, e1009606.Research output: Contribution to journal › Article › peer-review
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Transmission, adaptation and geographical spread of the Pseudomonas aeruginosa Liverpool epidemic strain
Moore, M. P., Lamont, I. L., Williams, D., Paterson, S., Kukavica-Ibrulj, I., Tucker, N. P., Kenna, D. T. D., Turton, J. F., Jeukens, J., Freschi, L., Wee, B. A., Loman, N. J., Holden, S., Manzoor, S., Hawkey, P., Southern, K. W., Walshaw, M. J., Levesque, R. C., Fothergill, J. L. & Winstanley, C., 15 Mar 2021, In: Microbial Genomics.Research output: Contribution to journal › Article › peer-review
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2020
Quantifying the transmission of antimicrobial resistance at the human and livestock interface with genomics
Wee, B. A., Muloi, D. & van Bunnik, B. A. D., 1 Dec 2020, In: Clinical Microbiology and Infection. 11 p.Research output: Contribution to journal › Article › peer-review
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The Aedes aegypti Domino Ortholog p400 Regulates Antiviral Exogenous Small Interfering RNA Pathway Activity and ago-2 Expression
McFarlane, M., Almire, F., Kean, J., Donald, C. L., McDonald, A., Wee, B., Lauréti, M., Varjak, M., Terry, S., Vazeille, M., Gestuveo, R. J., Dietrich, I., Loney, C., Failloux, A-B., Schnettler, E., Pondeville, E. & Kohl, A., 8 Apr 2020, In: mSphere. 5, 2Research output: Contribution to journal › Article › peer-review
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Metagenomic sequencing of clinical samples reveals a single widespread clone of Lawsonia intracellularis responsible for porcine proliferative enteropathy.
Bengtsson, R., Wee, B., Yebra, G., Bacigalupe, R., Watson, E., Guedes, R. M. C., Jacobson, M., Stadejek, T., Archibald, A., Fitzgerald, R. & Ait-Ali, T., 2 Apr 2020, In: Microbial Genomics.Research output: Contribution to journal › Article › peer-review
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2018
Bovine Staphylococcus aureus superantigens stimulate the entire T 2 cell repertoire of cattle.
Wilson, G., Tuffs, S., Wee, B. A., Seo, K. S., Park, N., Connelley, T., Guinane, C. M., Morrison, W. & Fitzgerald, J., Nov 2018, In: Infection and Immunity. 86, 11, p. 1-16 16 p.Research output: Contribution to journal › Article › peer-review
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Whole genome sequencing reveals the emergence of a Pseudomonas aeruginosa shared strain sub-lineage among patients treated within a single cystic fibrosis centre
Wee, B. A., Tai, A. S., Sherrard, L. J., Ben Zakour, N. L., Hanks, K. R., Kidd, T. J., Ramsay, K. A., Lamont, I., Whiley, D. M., Bell, S. C. & Beatson, S. A., 30 Aug 2018, In: BMC Genomics. 19, 1, p. 644Research output: Contribution to journal › Article › peer-review
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2017
The Staphylococcus aureus superantigen SElX is a bifunctional toxin that inhibits neutrophil function: SElX Inhibits Neutrophil Function
Tuffs, S., James, D., Bestebroer, J., Richards, A., Goncheva, M., O'Shea, M., Wee, B. A., Seo, K. S., Schlievert, P. M., Lengeling, A., van Strijp, J. A. G., Torres, V. J. & Fitzgerald, J., 7 Sept 2017, In: PLoS Pathogens. 13, 9, e1006461.Research output: Contribution to journal › Article › peer-review
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Tandem amplification of SCCmec can drive high level methicillin resistance in MRSA
Gallagher, L. A., Coughlan, S., Black, N. S., Lalor, P., Waters, E. M., Wee, B., Watson, M., Downing, T., Fitzgerald, J. R., Fleming, G. T. A. & O'gara, J. P., Sept 2017, In: Antimicrobial Agents and Chemotherapy. 61, 9, e00869-17.Research output: Contribution to journal › Article › peer-review
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Within-host whole genome analysis of an antibiotic resistant Pseudomonas aeruginosa strain sub-type in cystic fibrosis
Sherrard, L. J., Tai, A. S., Wee, B. A., Ramsay, K. A., Kidd, T. J., Ben Zakour, N. L., Whiley, D. M., Beatson, S. A., Bell, S. C. & Chotirmall, S. H. (ed.), 8 Mar 2017, In: PLoS ONE. 12, 3, e0172179.Research output: Contribution to journal › Article › peer-review
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