Catherine Kidner

2023

Genome-wide data reveal cryptic diversity and hybridization in a group of tree ferns

Yi, H., Dong, S., Yang, L., Wang, J., Kidner, C. & Kang, M., 22 Apr 2023, In: Molecular phylogenetics and evolution. 184, 43 p., 107801.

Research output: Contribution to journal › Article › peer-review

Open Access

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Diversity and Divergence: Evolution of secondary metabolism in the tropical tree genus Inga

Forrister, D. L., Endara, M-J., Soule, A. J., Younkin, G. C., Mills, A. G., Lokvam, J., Dexter, K., Pennington, T., Kidner, C. A., Nicholls, J. A., Loiseau, O., Kursar, T. A. & Coley, P. D., 1 Jan 2023, In: New Phytologist. 237, 2, p. 631-642

Research output: Contribution to journal › Article › peer-review

Open Access

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2022

A highly contiguous, scaffold-level nuclear genome assembly for the fever tree (Cinchona pubescens Vahl) as a novel resource for Rubiaceae research

Canales, N. A., Pérez-Escobar, O. A., Powell, R. F., Töpel, M., Kidner, C., Nesbitt, M., Maldonado, C., Barnes, C. J., Rønsted, N., Przelomska, N. A. S., Leitch, I. J. & Antonelli, A., 6 Oct 2022, In: GigaByte (Hong Kong, China). 2022, 16 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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A hybrid capture bait set for begonia

Michel, T., Tseng, Y-H., Wilson, H., Chung, K-F. & Kidner, C., 18 Aug 2022, In: Edinburgh Journal of Botany. 79, p. 1-33 33 p., 409.

Research output: Contribution to journal › Article › peer-review

Open Access

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Comparative transcriptome analysis of two closely related begonia species reveals divergent patterns in key light-regulated pathways

Emelianova, K. & Kidner, C., 18 Aug 2022, In: Edinburgh Journal of Botany. 79, p. 1-18 398.

Research output: Contribution to journal › Article › peer-review

Open Access

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Genomes shed light on the evolution of Begonia, a mega‐diverse genus

Li, L., Chen, X., Fang, D., Dong, S., Guo, X., Li, N., Campos‐Dominguez, L., Wang, W., Liu, Y., Lang, X., Peng, Y., Tian, D., Thomas, D. C., Mu, W., Liu, M., Wu, C., Yang, T., Zhang, S., Yang, L., Yang, J., & 23 othersLiu, ZJ., Zhang, L., Zhang, X., Chen, F., Jiao, Y., Guo, Y., Hughes, M., Wang, W., Liu, X., Zhong, C., Li, A., Sahu, S. K., Yang, H., Wu, E., Sharbrough, J., Lisby, M., Liu, X., Xu, X., Soltis, D. E., Van De Peer, Y., Kidner, C., Zhang, S. & Liu, H., 1 Apr 2022, In: New Phytologist. 234, 1, p. 295-310 16 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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2021

Multi-tissue transcriptome analysis of two Begonia species reveals dynamic patterns of evolution in the chalcone synthase gene family

Emelianova, K., Martínez Martínez, A., Campos-Dominguez, L., Kidner, C. & Work enabled by Edinburgh Genomics, 7 Sept 2021, In: Scientific Reports. 11, 1, 12 p., 17773.

Research output: Contribution to journal › Article › peer-review

Open Access

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Phylogeny and biogeography of Ceiba Mill. (Malvaceae, Bombacoideae)

Pezzini, F. F., Dexter, K. G., De Carvalho-sobrinho, J. G., Kidner, C. A., Nicholls, J. A., De Queiroz, L. P. & Pennington, R. T., 5 Jan 2021, (E-pub ahead of print) In: Frontiers of Biogeography. 0, 0

Research output: Contribution to journal › Article › peer-review

Open Access

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2020

Hybrid capture of 964 nuclear genes resolves evolutionary relationships in the mimosoid legumes and reveals the polytomous origins of a large pantropical radiation

Koenen, E. J. M., Kidner, C. A., de Souza, É. R., Simon, M. F., Iganci, J. R., Nicholls, J., Brown, G. K., P. De Queiroz, L., Luckow, M., Lewis, G. P., Pennington, R. T. & Hughes, C. E., 1 Dec 2020, In: American Journal of Botany. 107, 12, p. 1710-1735 26 p., 1568.

Research output: Contribution to journal › Article › peer-review

Open Access

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The origin of the legumes is a complex paleopolyploid phylogenomic tangle closely associated with the cretaceous-paleogene (K-Pg) mass extinction event

Koenen, E. J. M., Ojeda, D. I., Bakker, F. T., Wieringa, J. J., Kidner, C., Hardy, O. J., Pennington, R. T., Herendeen, P. S., Bruneau, A. & Hughes, C. E., 1 Jun 2020, In: Systematic biology. syaa041.

Research output: Contribution to journal › Article › peer-review

Open Access

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2019

The limits of Hyb-Seq for herbarium specimens: Impact of preservation techniques

Forrest, L. L., Hart, M. L., Hughes, M., Wilson, H. P., Chung, K., Tseng, Y. & Kidner, C. A., 26 Nov 2019, In: Frontiers in Ecology and Evolution. 7

Research output: Contribution to journal › Article › peer-review

Open Access

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Large-scale genomic sequence data resolve the deepest divergences in the legume phylogeny and support a near-simultaneous evolutionary origin of all six subfamilies

Koenen, E. J. M., Ojeda, D. I., Steeves, R., Migliore, J., Bakker, F. T., Wieringa, J. J., Kidner, C., Hardy, O. J., Pennington, R. T., Bruneau, A. & Hughes, C. E., 30 Oct 2019, In: New Phytologist.

Research output: Contribution to journal › Article › peer-review

Open Access

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Macroevolutionary patterns in overexpression of tyrosine: An anti‐herbivore defence in a speciose tropical tree genus, Inga (Fabaceae)

Coley, P. D., Endara, M., Ghabash, G., Kidner, C. A., Nicholls, J. A., Pennington, R. T., Mills, A. G., Soule, A. J., Lemes, M. R., Stone, G. N., Kursar, T. A. & Shefferson, R. (ed.), 13 May 2019, (E-pub ahead of print) In: Journal of Ecology. 107, 4, p. 1620-1632

Research output: Contribution to journal › Article › peer-review

Open Access

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2018

Next-generation sequencing and systematics: What can a billion base pairs of DNA sequence data do for you?

Harrison, N. & Kidner, C. A., 27 Dec 2018, In: Taxon. 60, 6, p. 1552-1566 15 p.

Research output: Contribution to journal › Literature review › peer-review

Ultrastructure and development of non-contiguous stomatal clusters and helicocytic patterning in Begonia

Rudall, P. J., Julier, A. C. M. & Kidner, C. A., 5 Oct 2018, In: Annals of Botany. 122, 5, p. 767-776 17 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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Tracking of Host Defenses and Phylogeny During the Radiation of Neotropical Inga-Feeding Sawflies (Hymenoptera; Argidae)

Endara, M-J., Nicholls, J., Coley, P. D., Forrister, D. L., Younkin, G. C., Dexter, K., Kidner, C., Pennington, R. T., Stone, G. & Kursar, T. A., 23 Aug 2018, In: Frontiers in plant science. 9, 16 p., 1237.

Research output: Contribution to journal › Article › peer-review

Open Access

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A first genetic map in the genus Streptocarpus generated with RAD sequencing based SNP markers

Chen, Y. Y., Nishii, K., Barber, S., Hackett, C., Kidner, C. A., Gharbi, K., Nagano, A. J., Iwamoto, A. & Möller, M., 1 Jul 2018, In: South african journal of botany. 117, p. 158-168 11 p.

Research output: Contribution to journal › Article › peer-review

Chemocoding as an identification tool where morphological- and DNA-based methods fall short: Inga as a case study

Endara, M-J., Coley, P. D., Wiggins, N. L., Forrister, D. L., Younkin, G. C., Nicholls, J., Pennington, R. T., Dexter, K., Kidner, C., Stone, G. & Kursar, T. A., 1 Apr 2018, In: New Phytologist. 2018, 2, p. 847-858 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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Transcriptome mining for phylogenetic markers in a recently radiated genus of tropical plants (Renealmia L.f., Zingiberaceae).

Valderrama Escallon, E., Richardson, J. E., Kidner, C., Madriñán, S. & Stone, G., 1 Feb 2018, In: Molecular phylogenetics and evolution. 119, p. 13-24 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

File

2016

Retrieval of hundreds of nuclear loci from herbarium specimens

Hart, M., Forrest, L. L., Nicholls, J. & Kidner, C., 12 Oct 2016, (E-pub ahead of print) In: Taxon.

Research output: Contribution to journal › Article › peer-review

Open Access

File

Comparative Analysis of Begonia Plastid Genomes and Their Utility for Species-Level Phylogenetics

Harrison, N., Harrison, R. J. & Kidner, C. A., 8 Apr 2016, In: PLoS ONE. 11, 4, 17 p., e0153248.

Research output: Contribution to journal › Article › peer-review

Open Access

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First steps in studying the origins of secondary woodiness in Begonia (Begoniaceae): Combining anatomy, phylogenetics, and stem transcriptomics

Kidner, C., Groover, A., Thomas, D. C., Emelianova, K., Soliz-Gamboa, C. & Lens, F., Jan 2016, In: Biological journal of the linnean society. 117, 1, p. 121-138 18 p.

Research output: Contribution to journal › Article › peer-review

Open Access

File

2015

Maintenance of species boundaries in a Neotropical radiation of Begonia

Twyford, A. D., Kidner, C. A. & Ennos, R. A., 1 Oct 2015, In: Molecular Ecology. 24, 19, p. 4982-4993 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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Using targeted enrichment of nuclear genes to increase phylogenetic resolution in the neotropical rain forest genus Inga (Leguminosae: Mimosoideae)

Nicholls, J. A., Pennington, R. T., Koenen, E. J. M., Hughes, C. E., Hearn, J., Bunnefeld, L., Dexter, K. G., Stone, G. N. & Kidner, C. A., 17 Sept 2015, In: Frontiers in plant science. 6, 20 p., 710.

Research output: Contribution to journal › Article › peer-review

Open Access

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2014

The evolution of sex ratio differences and inflorescence architectures in Begonia (Begoniaceae)

Twyford, A., Ennos, R., D. White, C., Shaukat Ali, M. & Kidner, C., Feb 2014, In: American Journal of Botany. 101, 2, p. 308-317

Research output: Contribution to journal › Article › peer-review

2013

Genetic differentiation and species cohesion in two widespread Central American Begonia species

Twyford, A., Kidner, C. A. & Ennos, R. A., 13 Nov 2013, In: Heredity. 112, 4, p. 382–390

Research output: Contribution to journal › Article › peer-review

Population history and seed dispersal in widespread Central American Begonia species (Begoniaceae) inferred from plastome-derived microsatellite markers

Twyford, A., Kidner, C. A., Harrison, N. & Ennos, R. A., Jan 2013, In: Botanical journal of the linnean society. 171, 1, p. 260-276 17 p.

Research output: Contribution to journal › Article › peer-review

2012

Genomic Resources for Evolutionary Studies in the Large, Diverse, Tropical Genus, Begonia

Kidner, C., Brennan, A., Bridgett, S., Shaukat Ali, M., Harrison, N., Matthews, A., Pellicier, J. & Twyford, A., Dec 2012, In: Tropical Plant Biology. 5, 4, p. 261-276 16 p.

Research output: Contribution to journal › Article › peer-review

2011

The Origin of Diversity in Begonia: Genome dynamism, population processes and phylogenetic patterns.

DeWitte, A., Twyford, A., Thomas, D., Kidner, C. & Van Huylenbroeck, J., 2011, The Dynamical Processes of Biodiversity - Case Studies of Evolution and Spatial Distribution. Grillo, O. & Venora, G. (eds.). InTech, p. 27-52

Research output: Chapter in Book/Report/Conference proceeding › Chapter (peer-reviewed)

Open Access

File

2010

A complex case of simple leaves: indeterminate leaves co-express ARP and KNOX1 genes

Nishii, K., Moeller, M., Kidner, C., Spada, A., Mantegazza, R., Wang, C-N. & Nagata, T., 30 Jun 2010, In: Development genes and evolution. 220, 1-2, p. 25-40 16 p.

Research output: Contribution to journal › Article › peer-review

The many roles of small RNAs in leaf development

Kidner, C. A., Jan 2010, In: Journal of Genetics and Genomics. 37, 1, p. 13-21 9 p.

Research output: Contribution to journal › Literature review › peer-review

Chapter Five – Signaling Sides: Adaxial–Abaxial Patterning in Leaves

Kidner, C. A. & Timmermans, M. C. P., 2010, Plant Development. Timmermans, M. C. P. (ed.). Elsevier, Vol. 91. p. 141-168 28 p. (Current Topics in Developmental Biology).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Patches, pegs and piggies

Kidner, C. A. & Wrigley, S., 2010, In: New Phytologist. 187, 1, p. 14-7 4 p.

Research output: Contribution to journal › Letter › peer-review

Why is leaf shape so variable?

Kidner, C. & Umbreen, S., 2010, In: International Journal of Plant Developmental Biology. 4, SI1, p. 64-75 12 p.

Research output: Contribution to journal › Literature review › peer-review

2009

03-P089 A simple leaf with compound gene expression: Indeterminate leaves co-express ARP and KNOX genes

Nishii, K., Moeller, M., Kidner, C., Spada, A., Mantegazza, R., Hsu, H-C., Nagata, T. & Wang, C-N., 31 Aug 2009, In: Mechanisms of Development. 126, p. S93-S93 1 p.

Research output: Contribution to journal › Article › peer-review

2007

Leaf evolution: working with what's to hand

Kidner, C. A., 2007, In: Evolution & Development. 9, 4, p. 321-2 2 p.

Research output: Contribution to journal › Article › peer-review

Mixing and matching pathways in leaf polarity

Kidner, C. A. & Timmermans, M. C. P., 2007, In: Current opinion in plant biology. 10, 1, p. 13-20 8 p.

Research output: Contribution to journal › Article › peer-review

2006

In situ hybridization as a tool to study the role of microRNAs in plant development

Kidner, C. & Timmermans, M., 1 Jan 2006, In: Methods in molecular biology (Clifton, N.J.). 342, p. 159-179 21 p.

Research output: Contribution to journal › Review article › peer-review

The Evolution of Diversity in Begonia

Kidner, C., 2006, Floriculture, Ornamental and Plant Biotechnology: Advances and Topical Issues. Teixeira da Silva, J. A. (ed.). Global Science Books, Vol. IV. p. 606 612 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter (peer-reviewed)

2005

The developmental role of microRNA in plants

Kidner, C. A. & Martienssen, R. A., 2005, In: Current opinion in plant biology. 8, 1, p. 38-44 7 p.

Research output: Contribution to journal › Article › peer-review

The role of ARGONAUTE1 (AGO1) in meristem formation and identity

Kidner, C. A. & Martienssen, R. A., 2005, In: Developmental Biology. 280, 2, p. 504-17 14 p.

Research output: Contribution to journal › Article › peer-review

2004

Transposons, small interfering RNA and the origin of heterochromatin.

Martienssen, R., Lippman, Z., May, B., Vaughn, M., Gendrel, A. V., Ronemus, M., Volpe, T., Kidner, C. & Colot, V., Mar 2004, In: European journal of cell biology. 83, p. 61-61 1 p.

Research output: Contribution to journal › Article › peer-review