Chris Brackley

Search results

• Predicting the three-dimensional folding of cis-regulatory regions in mammalian genomes using bioinformatic data and polymer models

  Brackley, C. (Creator), Brown, J. M. (Creator), Waithe, D. (Creator), Babbs, C. (Creator), Davies, J. A. (Creator), Hughes, J. R. (Creator), Buckle, V. J. (Creator) & Marenduzzo, D. (Creator), Edinburgh DataShare, 8 Jan 2016

  DOI: 10.7488/ds/1306, http://arxiv.org/pdf/1601.02822.pdf

  Dataset

• Transcription modulates chromatin dynamics and locus configuration sampling

  Forte, G. (Creator), Boyle, S. (Creator), Brackley, C. (Creator), Buckle, A. (Creator), Marenduzzo, D. (Creator) & Gilbert, N. (Creator), Edinburgh DataShare, 26 Jun 2023

  DOI: 10.7488/ds/7477

  Dataset

• Polymer Modelling Predicts Chromosome Reorganisation in Senescence

  Chandra, T. (Creator), Michieletto, D. (Creator), Chiang, M. (Creator), Brackley, C. (Creator), Rattanavirotkul, N. (Creator), Mohammed, H. (Creator) & Marenduzzo, D. (Creator), Edinburgh DataShare, 26 Jul 2019

  DOI: 10.7488/ds/2593

  Dataset

• High-resolution simulations of chromatin folding at genomic rearrangements in malignant B cells provide mechanistic insights on proto-oncogene deregulation

  Rico, D. (Creator), Brackley, C. (Creator), Mikulasova, A. (Creator), Karataraki, N. (Creator), Kent, D. (Creator), Russell, L. J. (Creator), Javierre, B. M. (Creator), Walker, B. A. (Creator) & Berlinguer-Palmini, R. (Creator), Edinburgh DataShare, 17 May 2022

  DOI: 10.7488/ds/3457

  Dataset

• Mechanisms for destabilisation of RNA viruses at air-water and liquid-liquid interfaces

  Brackley, C. (Creator), Lips, A. (Creator), Morozov, A. (Creator), Poon, W. (Creator) & Marenduzzo, D. (Creator), Edinburgh DataShare, 22 Oct 2021

  DOI: 10.7488/ds/3152

  Dataset

• Nucleosome positions alone can be used to predict domains in yeast chromosomes

  Marenduzzo, D. (Creator), Wiese, O. (Creator) & Brackley, C. (Creator), Edinburgh DataShare, 21 Aug 2019

  DOI: 10.7488/ds/2610, https://doi.org/10.1073/pnas.1817829116

  Dataset

• Simulating the chromatin mediated phase separation of model proteins with multiple domains

  Ancona, M. (Creator) & Brackley, C. (Creator), Edinburgh DataShare, 7 Jun 2022

  DOI: 10.7488/ds/3474, https://arxiv.org/abs/2107.14518

  Dataset

• Polymer Simulations of Heteromorphic Chromatin Predict the 3-D Folding of Complex Genomic Loci

  Buckle, A. (Creator), Brackley, C. (Creator), Marenduzzo, D. (Creator) & Gilbert, N. (Creator), Edinburgh DataShare, 4 Sept 2018

  DOI: 10.7488/ds/2434

  Dataset

• Genome-wide chromosome architecture prediction reveals biophysical principles underlying gene structure

  Marenduzzo, D. (Creator), Gilbert, N. (Creator), Chiang, M. (Creator), Brackley, C. (Creator), Naughton, C. (Creator), Nozawa, R. (Creator) & Battaglia, C. (Creator), Edinburgh DataShare, 22 Oct 2024

  DOI: 10.7488/ds/7821

  Dataset