Clemence Fraslin

2025

In-depth investigation of genome to refine QTL positions for spontaneous sex-reversal in XX rainbow trout: QTL for spontaneous sex-reversal in XX rainbow trout

Dehaullon, A., Fraslin, C., Bestin, A., Poncet, C., Guiguen, Y., Quillet, E. & Phocas, F., May 2025, In: PLoS ONE. 20, 5, p. 1-25 25 p., e0313464.

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First genome-wide association and genomic prediction of ammonia‑nitrogen tolerance in tiger pufferfish (Takifugu rubripes)

Chi, Y., Fraslin, C., Mukiibi, R., Hu, Y., Li, W., Robledo, D., Chen, S. & Li, Y., 30 Apr 2025, In: Aquaculture. 600, p. 1-28 28 p., 742260.

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A newly developed 20K SNP array reveals QTLs for disease resistance to Cryptocaryon irritans in tiger pufferfish (Takifugu rubripes)

Li, Y., Fraslin, C., Chi, Y., Mukiibi, R., Hu, Y., Wang, J., Li, W., Li, W., Houston, R., Robledo, D. & Chen, S., 30 Jan 2025, In: Aquaculture. 595, 2, p. 1-9 9 p.

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2024

Genetic diversity and population structure of farmed and wild Nile tilapia (Oreochromis niloticus) in Uganda: The potential for aquaculture selection and breeding programs

Robledo, D., Ogwang, J., Byakora, E., Schulze, J. N., Benda, K. K., Fraslin, C., Salisbury, S., Solimo, M., Mayega, J. F., Peter, B., Masembe, C., Houston, R. & Mukiibi, R., Jan 2024, In: Genomics. 116, 1, p. 1-12 12 p., 110781.

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2023

Potential of low-density genotype imputation for cost-efficient genomic selection for resistance to Flavobacterium columnare in rainbow trout (Oncorhynchus mykiss)

Fraslin, C., Robledo, D., Kause, A. & Houston, R., Dec 2023, In: Genetics Selection Evolution. 55, 1, p. 1-16 16 p., 59.

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Evaluation of low-density SNP panels and imputation for cost-effective genomic selection in four aquaculture species

Kriaridou, C., Tsairidou, S., Fraslin, C., Gorjanc, G., Looseley, M., Johnston, I. A., Houston, R. & Robledo, D., 11 May 2023, (E-pub ahead of print) In: Frontiers in Genetics. 14, p. 1-16 15 p., 1194266.

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2022

Genome-wide association and genomic prediction of resistance to Flavobacterium columnare in a farmed rainbow trout population

Fraslin, C., Koskinen, H., Nousianen, A., Houston, R. D. & Kause, A., 30 Aug 2022, In: Aquaculture. 557, 738332.

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Conserved QTL and chromosomal inversion affect resistance to columnaris disease in two rainbow trout (Oncorhyncus mykiss) populations

Calboli, F. C. F., Koskinen, H., Nousianen, A., Fraslin, C., Houston, R. D. & Kause, A., 29 Jul 2022, In: G3: Genes | Genomes | Genetics. 12, 8, p. 1-14 jkac137.

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Conserved QTL and chromosomal inversion affect resistance to columnaris disease in 2 rainbow trout (Oncorhyncus mykiss) populations

Calboli, F. C. F., Koskinen, H., Nousianen, A., Fraslin, C., Houston, R. D., Kause, A. & Koning, D. J. D. (Editor), 12 Jun 2022, In: G3 Genes|Genomes|Genetics. 12, 8, p. 1-14 13 p., jkac137.

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The impact of genetic relationship between training and validation populations on genomic prediction accuracy in Atlantic salmon

Fraslin, C., Yanez, J. M., Robledo, D. & Houston, R., Apr 2022, In: Aquaculture reports. 23, 101033.

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2020

Genetic determinism of spontaneous masculinisation in XX female rainbow trout: new insights using medium throughput genotyping and whole-genome sequencing

Fraslin, C., Phocas, F., Bestin, A., Charles, M., Bernard, M., Krieg, F., Dechamp, N., Ciobotaru, C., Hozé, C., Petitprez, F., Milhes, M., Lluch, J., Bouchez, O., Poncet, C., Hocdé, P., Haffray, P., Guiguen, Y. & Quillet, E., 19 Oct 2020, (E-pub ahead of print) In: Scientific Reports.

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Combining multiple approaches and models to dissect the genetic architecture of resistance to infections in fish

Fraslin, C., Quillet, E., Rochat, T., Dechamp, N., Bernardet, J.-F., Collet, B., Lallias, D. & Boudinot, P., 10 Jul 2020, (E-pub ahead of print) In: Frontiers in Genetics.

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How to genetically increase fillet yield in fish: Relevant genetic parameters and methods to predict genetic gain

Vandeputte, M., Fraslin, C., Haffray, P., Bestin, A., Allal, F., Kocour, M., Prchal, M. & Dupont-Nivet, M., 30 Mar 2020, In: Aquaculture. 519, p. 1-11 10 p., 734877.

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2019

Genome-wide estimates of genetic diversity, inbreeding and effective size of experimental and commercial rainbow trout lines undergoing selective breeding

D'Ambrosio, J., Phocas, F., Haffray, P., Bestin, A., Brard-Fudulea, S., Poncet, C., Quillet, E., Dechamp, N., Fraslin, C., Charles, M. & Dupont-Nivet, M., Dec 2019, In: Genetics Selection Evolution.

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2018

Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions.

Fraslin, C., Dechamp, N., Bernard, M., Krieg, F., Hervet, C., Guyomard, R., Esquerré, D., Barbieri, J., Kuchly, C., Duchaud, E., Boudinot, P., Rochat, T., Bernardet, J. & Quillet, E., 16 Nov 2018, In: Genetics Selection Evolution.

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Clemence Fraslin

Research output

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