JT McCrone

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  • Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic

    The COVID-19 Genomics UK (COG-UK) Consortium, 17 Aug 2021, In: Cell. 184, 20, p. 5179-5188.e8 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
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  • Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool

    O’Toole, Á., Scher, E., Underwood, A., Jackson, B., Hill, V., McCrone, J. T., Colquhoun, R., Ruis, C., Abu-Dahab, K., Taylor, B., Yeats, C., Du Plessis, L., Maloney, D., Medd, N., Attwood, S. W., Aanensen, D. M., Holmes, E. C., Pybus, O. G. & Rambaut, A., 30 Jul 2021, In: Virus Evolution. 9 p., veab064.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    File
  • Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil

    Faria, N. R., Mellan, T. A., Whittaker, C., Claro, I. M., Candido, D. D. S., Mishra, S., Crispim, M. A. E., Sales, F. C. S., Hawryluk, I., McCrone, J. T., Hulswit, R. J. G., Franco, L. A. M., Ramundo, M. S., de Jesus, J. G., Andrade, P. S., Coletti, T. M., Ferreira, G. M., Silva, C. A. M., Manuli, E. R., Pereira, R. H. M. & 52 others, Peixoto, P. S., Kraemer, M. U. G., Gaburo, N., Camilo, C. D. C., Hoeltgebaum, H., Souza, W. M., Rocha, E. C., de Souza, L. M., de Pinho, M. C., Araujo, L. J. T., Malta, F. S. V., de Lima, A. B., Silva, J. D. P., Zauli, D. A. G., Ferreira, A. C. D. S., Schnekenberg, R. P., Laydon, D. J., Walker, P. G. T., Schlüter, H. M., Dos Santos, A. L. P., Vidal, M. S., Del Caro, V. S., Filho, R. M. F., Dos Santos, H. M., Aguiar, R. S., Proença-Modena, J. L., Nelson, B., Hay, J. A., Monod, M., Miscouridou, X., Coupland, H., Sonabend, R., Vollmer, M., Gandy, A., Prete, C. A., Nascimento, V. H., Suchard, M. A., Bowden, T. A., Pond, S. L. K., Wu, C-H., Ratmann, O., Ferguson, N. M., Dye, C., Loman, N. J., Lemey, P., Rambaut, A., Fraiji, N. A., Carvalho, M. D. P. S. S., Pybus, O. G., Flaxman, S., Bhatt, S. & Sabino, E. C., 14 Apr 2021, In: Science. 14 p., eabh2644.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    File
  • Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England

    COVID-19 Genomics UK (COG-UK) Consortium, Flaxman, S., Ratmann, O., Bhatt, S., Hopkins, S., Gandy, A., Rambaut, A. & Ferguson, N. M., 25 Mar 2021, In: Nature. 593, p. 266-269 4 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    File
  • Establishment & lineage dynamics of the SARS-CoV-2 epidemic in the UK

    du Plessis, L., McCrone, J. T., Zarebski, A. E., Hill, V., Ruis, C., Gutierrez, B., Raghwani, J., Ashworth, J., Colquhoun, R., Connor, T. R., Faria, N. R., Jackson, B., Loman, N. J., O'Toole, Á., Nicholls, S. M., Parag, K. V., Scher, E., Vasylyeva, T. I., Volz, E. M., Watts, A. & 6 others, Bogoch, I. I., Khan, K., Aanensen, D. M., Kraemer, M. U. G., Rambaut, A. & Pybus, O. G., 12 Feb 2021, In: Science. 371, 6530, p. 708-712 5 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    File