Kenneth Baillie

2024

Retrospective analysis of hospital electronic health records reveals unseen cases of acute hepatitis with unknown aetiology in adults in Oxfordshire

Tan, C. C. S., Kelly, G., Cregan, J., Wilson, J. D., James, T., Chand, M., Hopkins, S., Swets, M., Baillie, J. K., Jeffery, K., Walker, A. S., Eyre, D. W., Stoesser, N. & Matthews, P. C., Dec 2024, In: BMC Public Health. 24, 1, p. 1-11 11 p., 1890.

Research output: Contribution to journal › Article › peer-review

Open Access

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Causal inference can lead us to modifiable mechanisms and informative archetypes in sepsis

Baillie, J. K., Angus, D., Burnham, K., Calandra, T., Calfee, C., Gutteridge, A., Hacohen, N., Khatri, P., Langley, R., Ma’ayan, A., Marshall, J., Maslove, D., Prescott, H. C., Rowan, K., Scicluna, B. P., Seymour, C., Shankar-Hari, M., Shapiro, N., Wiersinga, W. J., Singer, M., & 1 othersRandolph, A. G., 21 Oct 2024, (E-pub ahead of print) In: Intensive Care Medicine.

Research output: Contribution to journal › Article › peer-review

Open Access

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Stratified analyses refine association between TLR7 rare variants and severe COVID-19

Spanish/Italian Severe COVID-19 Sequencing group, Coughlan, E., Pairo-Castineira, E. & Baillie, J. K., 10 Oct 2024, In: Human Genetics and Genomics Advances. 5, 4, p. 1-12 12 p., 100323.

Research output: Contribution to journal › Article › peer-review

Open Access

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ARAP3 protects from excessive formylated peptide-induced microvascular leakage by acting on endothelial cells and neutrophils

Chu, J. Y., McCormick, B., Sundaram, K., Hardisty, G., Karmakar, U., Pumpe, C., Krull, E., Lucas, C. D., Amado-Azevedo, J., Hordijk, P. L., Caporali, A., Mellor, H., Baillie, J. K., Rossi, A. G. & Vermeren, S., 11 May 2024, In: Journal of Pathology. 263, 3, p. 347-359

Research output: Contribution to journal › Article › peer-review

Open Access

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Changes in hospital mortality in patients with cancer during the COVID-19 pandemic (ISARIC-CCP-UK): a prospective, multicentre cohort study

ISARIC4C Investigators, Elliot, S., Drake, T. M., Law, A., Oosthuyzen, W., Shaw, C. A., Baillie, J. K., Docherty, A. B. & Harrison, E. M., May 2024, In: The Lancet Oncology. 25, 5, p. 636-648 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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Reframing Sepsis Immunobiology for Translation

Shankar-Hari, M., Calandra, T., Soares, M. P., Bauer, M., Wiersinga, W. J., Prescott, H. C., Knight, J. C., Baillie, J. K., Bos, L. D. J., Derde, L. P. G., Finfer, S., Hotchkiss, R. S., Marshall, J., Openshaw, P., Seymour, C. W., Venet, F., Vincent, J-L., Le Tourneau, C., Maitland-van der Zee, A-H., McInnes, I. B., & 1 othersPoll, T. V. D., 23 Feb 2024, In: The Lancet Respiratory Medicine.

Research output: Contribution to journal › Article › peer-review

Open Access

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Sex Differences in Post-acute Neurological Sequelae of SARS-CoV-2 and Symptom Resolution in Adults after COVID-19 Hospitalization: An International Multicenter Prospective Observational Study: Prevalence and Risk of Neurological Long COVID

Cho, S. M., Premraj, L., Battaglini, D., Fanning, J. P., Suen, J., Bassi, G. L., Fraser, J., Robba, C., Griffee, M., Solomon, T., Semple, M. G., Baillie, K., Sigfrid, L., Scott, J. T., Citarella, B. W., Merson, L., Arora, R. C., Whitman, G., Thomson, D. & White, N., 9 Feb 2024, (E-pub ahead of print) In: Brain Communications. 6, 2, fcae036.

Research output: Contribution to journal › Article › peer-review

Open Access

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Dimethyl fumarate in patients admitted to hospital with COVID-19 (RECOVERY): a randomised, controlled, open-label, platform trial

RECOVERY Collaborative Group & Baillie, J. K., 31 Jan 2024, (E-pub ahead of print) In: Nature Communications. 15, 1, p. 1-13 13 p., 924.

Research output: Contribution to journal › Article › peer-review

Open Access

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Accelarated immune ageing is associated with COVID-19 disease severity

ISARIC4C Investigators, Adeloye, D., Baillie, JK., Bularga, A., Daines, L., Lone, NI., Mills, NL., Newby, DE., Pius, R., Shankar-Hari, M., Sheikh, A., Sudlow, CL., Walmsley, S. & Zheng, B., 11 Jan 2024, In: Immunity and Ageing. 21, 1, 18 p., 6.

Research output: Contribution to journal › Article › peer-review

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2023

Delayed mucosal anti-viral responses despite robust peripheral inflammation in fatal COVID-19

Sidhu, J. K., Siggins, M. K., Liew, F., Russell, C. D., Uruchurtu, A. S. S., Davis, C., Turtle, L., Moore, S. C., Hardwick, H. E., Oosthuyzen, W., Thomson, E. C., Semple, M. G., Baillie, J. K., Openshaw, P. J. M., Thwaites, R. S. & ISARIC4C Investigators, 22 Dec 2023, In: The Journal of Infectious Diseases. p. 1-13

Research output: Contribution to journal › Article › peer-review

Open Access

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Para-infectious brain injury in COVID-19 persists at follow-up despite attenuated cytokine and autoantibody responses

ISARIC4C Investigators, 22 Dec 2023, In: Nature Communications. 14, 1, 8487.

Research output: Contribution to journal › Article › peer-review

Open Access

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The non-classical major histocompatibility complex II protein SLA-DM is crucial for African swine fever virus replication

Pannhorst, K., Carlson, J., Hölper, J. E., Grey, F., Baillie, K., Höper, D., Wöhnke, E., Franzke, K., Karger, A., Fuchs, W. & Mettenleiter, T. C., Dec 2023, In: Scientific Reports. 13, 1, p. 1-18 18 p., 10342.

Research output: Contribution to journal › Article › peer-review

Open Access

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A pro-inflammatory gut mucosal cytokine response is associated with mild COVID-19 disease and superior induction of serum antibodies

INSTINCT Study Group & Baillie, K. J., 22 Nov 2023, (E-pub ahead of print) In: Mucosal Immunology. 17, 1, p. 111-123 13 p.

Research output: Contribution to journal › Article › peer-review

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Evaluation of an automated choroid segmentation algorithm in a longitudinal kidney donor and recipient cohort

Burke, J., Pugh, D., Farrah, T., Hamid, C., Godden, E., MacGillivray, T., Dhaun, N., Baillie, J. K., King, S. E. & Maccormick, I. J. C., 17 Nov 2023, In: Translational Vision Science & Technology. 12, 11, 19.

Research output: Contribution to journal › Article › peer-review

Open Access

Evaluation of pragmatic oxygenation measurement as a proxy for Covid-19 severity

Swets, M. C., Kerr, S., Scott-Brown, J., Brown, A., Gupta, R. K., Millar, J., Spata, E., McCurrach, F., Bretherick, A. D., Docherty, A. B., Harrison, D., Rowan, K., Young, N., Groeneveld, G. H., Dunning, J., Nguyen-Van-Tam, J. S., Openshaw, P., Horby, P., Harrison, E. M., Staplin, N., & 3 othersSemple, M. G., Lone, N. I. & Baillie, J. K., 15 Nov 2023, In: Nature Communications. 14, 1, p. 1-10 10 p., 7374.

Research output: Contribution to journal › Article › peer-review

Open Access

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Multiorgan MRI findings after hospitalisation with COVID-19 in the UK (C-MORE): a prospective, multicentre, observational cohort study

The C-MORE/PHOSP-COVID Collaborative Group, Nov 2023, In: The Lancet Respiratory Medicine. 11, 11, p. 1003-1019 17 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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International Pediatric COVID-19 Severity Over the Course of the Pandemic

International Severe Acute Respiratory Infection Consortium (ISARIC4C) groupPediatric Active Enhanced Disease Surveillance (PAEDS) Network group, Baillie, K., Britton, P. N. & Short, K. R., 1 Oct 2023, In: JAMA pediatrics. 177, 10, p. 1073-1084 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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A second update on mapping the human genetic architecture of COVID-19

The COVID-19 Host Genetics Initiative, 6 Sept 2023, In: Nature. 621, 7977, p. E7-E26

Research output: Contribution to journal › Article › peer-review

Open Access

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Kynurenine monooxygenase regulates inflammation during critical illness and recovery in experimental acute pancreatitis

Hayes, A. J., Zheng, X., O'Kelly, J., Neyton, L. P. A., Bochkina, N. A., Uings, I., Liddle, J., Baillie, J. K., Just, G., Binnie, M., Homer, N. Z. M., Murray, T. B. J., Baily, J., McGuire, K., Skouras, C., Garden, O. J., Webster, S. P., Iredale, J. P., Howie, S. E. M. & Mole, D. J., 29 Aug 2023, In: Cell Reports. 42, 8, p. 1-23 23 p., 112763.

Research output: Contribution to journal › Article › peer-review

Open Access

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HLA-E-restricted SARS-CoV-2-specific T cells from convalescent COVID-19 patients suppress virus replication despite HLA class Ia down-regulation

ISARIC4C Investigators & Baillie, J. K., 30 Jun 2023, In: Science Immunology. 8, 84, p. 1-17 17 p., eabl8881.

Research output: Contribution to journal › Article › peer-review

Open Access

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Patient emergency health-care use before hospital admission for COVID-19 and long-term outcomes in Scotland: a national cohort study

Docherty, A. B., Farrell, J., Thorpe, M., Egan, C., Dunn, S., Norman, L., Shaw, C. A., Law, A., Leeming, G., Norris, L., Brooks, A., Prodan, B., MacLeod, R., Baxter, R., Morris, C., Rennie, D., Oosthuyzen, W., Semple, M. G., Baillie, J. K., Pius, R., & 3 othersSeth, S., Harrison, E. M. & Lone, N. I., 28 Jun 2023, In: The Lancet Digital Health. 5, 7, p. e446-e457 12 p.

Research output: Contribution to journal › Article › peer-review

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CAGE sequencing reveals CFTR-dependent dysregulation of type I IFN signaling in activated cystic fibrosis macrophages

Gillan, J. L., Chokshi, M., Hardisty, G. R., Clohisey Hendry, S., Prasca-Chamorro, D., Robinson, N. J., Lasota, B., Clark, R., Murphy, L., Whyte, M. K. B., Baillie, J. K., Davidson, D. J., Bao, G. & Gray, R. D., 26 May 2023, In: Science Advances. 9, 21, p. 1-17 17 p., eadg5128.

Research output: Contribution to journal › Article › peer-review

Open Access

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Recovery from Covid-19 critical illness: a secondary analysis of the ISARIC4C CCP-UK cohort study and the RECOVER trial

ISARIC4C and RECOVER Investigators, Pauley, E., Drake, T. M., Griffith, D. M., Lone, N. I., Harrison, E. M., Baillie, J. K., Scott, J. T., Walsh, T. S., Semple, M. G. & Docherty, A. B., 1 May 2023, In: Journal of the Intensive Care Society. 24, 2, p. 162-169 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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Adeno-associated virus 2 infection in children with non-A-E hepatitis

DIAMONDS consortium, Ho, A., Orton, R., Tayler, R., Asamaphan, P., Herder, V., Davis, C., Tong, L., Smollett, K., Manali, M., Allan, J., Rawlik, K., McDonald, S. E., Vink, E., Pollock, L., Gannon, L., Evans, C., McMenamin, J., Roy, K., Marsh, K., & 37 othersDivala, T., Holden, M. T. G., Lockhart, M., Yirrell, D., Currie, S., O'Leary, M., Henderson, D., Shepherd, S. J., Jackson, C., Gunson, R., MacLean, A., McInnes, N., Bradley-Stewart, A., Battle, R., Hollenbach, J., Henderson, P., Odam, M., Chikowore, P., Oosthuyzen, W., Chand, M., Hamilton, M. S., Estrada-Rivadeneyra, D., Levin, M., Avramidis, N., Pairo-Castineira, E., Vitart, V., Wilkie, C., Palmarini, M., Ray, S., Robertson, D. L., da Silva Filipe, A., Willett, B. J., Breuer, J., Semple, M. G., Turner, D., Baillie, J. K. & Thomson, E. C., May 2023, In: Nature. 617, 7961, p. 555-563 25 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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Genomic investigations of unexplained acute hepatitis in children

DIAMONDS consortium, Chikowore, P. & Baillie, K., May 2023, In: Nature. 617, 7961, p. 564-573 36 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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GWAS and meta-analysis identifies 49 genetic variants underlying critical Covid-19

GenOMICC Investigators, SCOURGE Consortium, ISARIC4C Investigators, 23andMe Covid-19 Team, Pairo-Castineira, E., Rawlik, K., Bretherick, A. D., Qi, T., Wu, Y., Nassiri, I., McConkey, G. A., Zechner, M., Klaric, L., Griffiths, F., Oosthuyzen, W., Kousathanas, A., Richmond, A., Millar, J., Russell, C. D., Malinauskas, T., & 39 othersThwaites, R., Morrice, K., Keating, S., Maslove, D. M., Nichol, A. D., Semple, M. G., Knight, J., Shankar-Hari, M., Summers, C., Hinds, C., Horby, P., Ling, L., McAuley, D. F., Montgomery, H., Openshaw, P. J. M., Begg, C., Walsh, T. S., Tenesa, A., Flores, C., Riancho, J. A., Rojas-Martinez, A., Lapunzina, P., Yang, J., Ponting, C. P., Wilson, J. F., Vitart, V., Abedalthagafi, M. S., Luchessi, A., Parra, E. J., Cruz, R., Carracedo, A., Fawkes, A., Murphy, L., Rowan, K., Pereira, A. C., Law, A., Fairfax, B. P., Clohisey Hendry, S. & Baillie, J. K., May 2023, In: Nature. 617, 7962, p. 764-768 30 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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Characteristics and outcomes of an international cohort of 600 000 hospitalized patients with COVID-19

ISARIC clinical characterisation group & Baillie, J. K., 19 Apr 2023, In: International Journal of Epidemiology. 52, 2, p. 355-376 21 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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SARS-CoV-2 antibody responses associate with sex, age and disease severity in previously uninfected people admitted to hospital with COVID-19: An ISARIC4C prospective study

ISARIC4C Investigators & Baillie, J. K., 15 Mar 2023, (E-pub ahead of print) In: Frontiers in Immunology. 14, p. 1-13 12 p., 1146702.

Research output: Contribution to journal › Article › peer-review

Open Access

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The P323L substitution in the SARS-CoV-2 polymerase (NSP12) confers a selective advantage during infection

ISARIC4C Investigators, Baillie, J. K. & Digard, P., 13 Mar 2023, (E-pub ahead of print) In: Genome Biology. 24, 1, p. 1-23 22 p., 47.

Research output: Contribution to journal › Article › peer-review

Open Access

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Variation in ERAP2 has opposing effects on severe respiratory infection and autoimmune disease

Hamilton, F., Mentzer, A. J., Parks, T., Baillie, J. K., Davey Smith, G., Ghazal, P. & Timpson, N. J., 7 Mar 2023, (E-pub ahead of print) In: The American Journal of Human Genetics. 110, 4, p. 691-702 11 p., 110.

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Open Access

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The molecular basis of differential host responses to avian influenza viruses in avian species with differing susceptibility

Morris, K., Mishra, A., Raut, A. A., Gaunt, E., Borowska, D., Kuo, R., Wang, B., Vijayakumar, P., Chingtham, S., Dutta, R., Baillie, J. K., Digard, P., Vervelde, L., Burt, D. & Smith, J., 28 Feb 2023, (E-pub ahead of print) In: Frontiers in Cellular and Infection Microbiology. 13, p. 1-17 16 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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NRF2 activation reprogrammes defects in oxidative metabolism to restore macrophage function in COPD

Ryan, E., Sadiku, P., Coelho, P., Watts, E. R., Zhang, A., Howden, A. J. M., Sanchez Garcia, M. A., Bewley, M. A., Cole, J., McHugh, B., Vermaelen, W., Ghesquiere, B., Carmeliet, P., Rodriguez Blanco, G., von Kriegsheim, A., Sanchez, Y., Rumsey, W., Callahan, J. F., Cooper, G., Parkinson, N., & 8 othersBaillie, J. K., Cantrell, D., McCafferty, J., Choudhury, G., Singh, D., Dockrell, D. H., Whyte, M. K. B. & Walmsley, S. R., 1 Feb 2023, (E-pub ahead of print) In: American Journal of Respiratory and Critical Care Medicine.

Research output: Contribution to journal › Article › peer-review

Open Access

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Outcome of COVID-19 in hospitalised immunocompromised patients: An analysis of the WHO ISARIC CCP-UK prospective cohort study

ISARIC4C Investigators, Turtle, L., Thorpe, M., Drake, T. M., Swets, M., Palmieri, C., Russell, C. D., Ho, A., Aston, S., Wootton, D. G., Richter, A., de Silva, T. I., Hardwick, H. E., Leeming, G., Law, A., Openshaw, P. J. M., Harrison, E. M., Baillie, J. K., Semple, M. G. & Docherty, A. B., 31 Jan 2023, In: PLoS Medicine. 20, 1, p. e1004086 e1004086.

Research output: Contribution to journal › Article › peer-review

Open Access

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Therapeutic potential of IL6R blockade for the treatment of sepsis and sepsis-related death: A mendelian randomisation study

Hamilton, F. W., Thomas, M., Arnold, D., Palmer, T., Moran, E., Mentzer, A. J., Maskell, N., Baillie, K., Summers, C., Hingorani, A., MacGowan, A., Khandaker, G. M., Mitchell, R., Davey Smith, G., Ghazal, P. & Timpson, N. J., Jan 2023, In: PLoS Medicine. 20, 1, e1004174.

Research output: Contribution to journal › Article › peer-review

Open Access

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2022

A Hybrid Architecture (CO-CONNECT) to Facilitate Rapid Discovery and Access to Data Across the United Kingdom in Response to the COVID-19 Pandemic: Development Study

Jefferson, E., Cole, C., Mumtaz, S., Cox, S., Giles, T., Adejumo, S., Urwin, E., Lea, D., McDonald, C., Best, J., Masood, E., Milligan, G., Johnston, J., Horban, S., Birced, I., Hall, C., Jackson, A., Collins, C., Rising, S., Dodsley, C., & 57 othersHampton, J., Hadfield, A., Santos, R., Tarr, S., Panagi, V., Lavagna, J., Jackson, T., Chuter, A., Beggs, J., Martinez-Queipo, M., Ward, H., von Ziegenweidt, J., Burns, F., Martin, J., Sebire, N., Morris, C., Bradley, D., Baxter, R., Ahonen-Bishop, A., Shoemark, A., Valdes, A., Ollivere, B. J., Manisty, C., Eyre, D. W., Gallant, S., Joy, G., McAuley, A., Connell, D. W., Northstone, K., Jeffery, K. J., Di Angelantonio, E., McMahon, A., Walker, M., Semple, M. G., Sims, J. M., Lawrence, E., Davies, B., Baillie, J. K., Tang, M., Leeming, G., Power, L., Breeze, T., Gilson, N., Murray, D. J., Orton, C., Pierce, I., Hall, I., Ladhani, S., Whitaker, M., Shallcross, L., Seymour, D., Varma, S., Reilly, G., Morris, A., Hopkins, S., Sheikh, A. & Quinlan, P., 27 Dec 2022, In: Journal of medical Internet research. 24, 12, p. e40035

Research output: Contribution to journal › Article › peer-review

Open Access

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SARS-CoV-2-specific nasal IgA wanes 9 months after hospitalisation with COVID-19 and is not induced by subsequent vaccination

ISARIC4C Investigators, Liew, F., Talwar, S., Cross, A., Willett, B. J., Scott, S., Logan, N., Siggins, M. K., Swieboda, D., Sidhu, J. K., Efstathiou, C., Moore, S. C., Davis, C., Mohamed, N., Nunag, J., King, C., Thompson, A. A. R., Rowland-Jones, S. L., Docherty, A. B., Chalmers, J. D., & 22 othersHo, L-P., Horsley, A., Raman, B., Poinasamy, K., Marks, M., Kon, O. M., Howard, L., Wootton, D. G., Dunachie, S., Quint, J. K., Evans, R. A., Wain, L. V., Fontanella, S., de Silva, T. I., Ho, A., Harrison, E., Baillie, J. K., Semple, M. G., Brightling, C., Thwaites, R. S., Turtle, L. & Openshaw, P. J. M., 16 Dec 2022, (E-pub ahead of print) In: EBioMedicine. p. 104402

Research output: Contribution to journal › Article › peer-review

Open Access

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Residual Lung Abnormalities Following COVID-19 Hospitalization: Interim Analysis of the UKILD Post-COVID Study

Stewart, I., Jacob, J., George, P. M., Molyneaux, P. L., Porter, J. C., Allen, R. J., Aslani, S., Baillie, J. K., Barratt, S. L., Beirne, P., Bianchi, S. M., Blaikley, J. F., Chalmers, J. D., Chambers, R. C., Chaudhuri, N., Coleman, C., Collier, G., Denneny, E. K., Docherty, A., Elneima, O., & 58 othersEvans, R. A., Fabbri, L., Gibbons, M. A., Gleeson, F. V., Gooptu, B., Greening, N. J., Guillen Guio, B., Hall, I. P., Hanley, N. A., Harris, V., Harrison, E. M., Heightman, M., Hillman, T. E., Horsley, A., Houchen-Wolloff, L., Jarrold, I., Johnson, S. R., Jones, M. G., Khan, F., Lawson, R., Leavy, O., Lone, N., Marks, M., McAuley, H., Mehta, P., Parekh, D., Piper Hanley, K., Platé, M., Pearl, J., Poinasamy, K., Quint, J. K., Raman, B., Richardson, M., Rivera-Ortega, P., Saunders, L., Saunders, R., Semple, M. G., Sereno, M., Shikotra, A., Simpson, A. J., Singapuri, A., Smith, D. J., Spears, M., Spencer, L. G., Stanel, S., Thickett, D., Thompson, A. A. R., Thorpe, M., Walsh, S. L., Walker, S., Weatherley, N. D., Weeks, M., Wild, J. M., Wootton, D. G., Brightling, C. E., Ho, L-P., Wain, L. V. & Jenkins, R. G., 1 Dec 2022, (E-pub ahead of print) In: American Journal of Respiratory and Critical Care Medicine.

Research output: Contribution to journal › Article › peer-review

Open Access

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Studying the Long-term Impact of COVID-19 in Kids (SLICK). Healthcare use and costs in children and young people following community-acquired SARS-CoV-2 infection: protocol for an observational study using linked primary and secondary routinely collected healthcare data from England, Scotland and Wales

Swann, O. V., Lone, N. I., Harrison, E. M., Tomlinson, L. A., Walker, A. J., Seaborne, M. J., Pollock, L., Farrell, J., Hall, P. S., Seth, S., Williams, T. C., Preston, J., Ainsworth, J. S., Semple, F. F., Baillie, J. K., Katikireddi, S. V., Akbari, A., Lyons, R., Simpson, C. R., Semple, M. G., & 4 othersGoldacre, B., Brophy, S., Sheikh, A. & Docherty, A. B., 10 Nov 2022, In: BMJ Open. 12, 11, p. e063271 e063271.

Research output: Contribution to journal › Article › peer-review

Open Access

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Viral Coinfections in Hospitalized Coronavirus Disease 2019 Patients Recruited to the International Severe Acute Respiratory and Emerging Infections Consortium WHO Clinical Characterisation Protocol UK Study

ISARIC4C Investigators, 9 Nov 2022, In: Open forum infectious diseases. 9, 11, ofac531.

Research output: Contribution to journal › Article › peer-review

Open Access

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Exome-wide association study to identify rare variants influencing COVID-19 outcomes: Results from the Host Genetics Initiative

COVID-19 Host Genetics Initiative & Baillie, J. K., 3 Nov 2022, In: PLoS Genetics. 18, 11, p. 1-26 e1010367.

Research output: Contribution to journal › Article › peer-review

Open Access

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Systematic comparison of ranking aggregation methods for gene lists in experimental results

Wang, B., Law, A., Regan, T., Parkinson, N., Cole, J., Russell, C. D., Dockrell, D. H., Gutmann, M. U. & Baillie, J. K., 31 Oct 2022, In: Bioinformatics. 38, 21, p. 4927-4933

Research output: Contribution to journal › Article › peer-review

Open Access

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Cystatin C is associated with adverse COVID-19 outcomes in diverse populations

Kleeman, S. O., Cordioli, M., Timmers, P. R. H. J., Khan, A., Tober-Lau, P., Kurth, F., Demichev, V., Meyer, H. V., Wilson, J. F., Ralser, M., Kiryluk, K., Ganna, A., Baillie, K. & Janowitz, T., 21 Oct 2022, In: iScience. 25, 10, 12 p., 105040.

Research output: Contribution to journal › Article › peer-review

Open Access

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Fewer COVID-19 neurological complications with dexamethasone and remdesivir

ISARIC4C Investigators & Baillie, J. K., 19 Oct 2022, (E-pub ahead of print) In: Annals of Neurology.

Research output: Contribution to journal › Article › peer-review

Open Access

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An international observational study to assess the impact of the Omicron variant emergence on the clinical epidemiology of COVID-19 in hospitalised patients

ISARIC clinical characterisation group, 5 Oct 2022, In: eLIFE. 11, 41 p., e80556.

Research output: Contribution to journal › Article › peer-review

Open Access

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Alternative pathway dysregulation in tissues drives sustained complement activation and predicts outcome across the disease course in COVID-19

ISARIC4C Investigators & Baillie, J. K., 29 Sept 2022, (E-pub ahead of print) In: Immunology .

Research output: Contribution to journal › Article › peer-review

Open Access

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Multiomic analysis reveals cell-type-specific molecular determinants of COVID-19 severity

Zhang, S., Cooper-Knock, J., Weimer, A. K., Shi, M., Kozhaya, L., Unutmaz, D., Harvey, C., Julian, T. H., Furini, S., Frullanti, E., Fava, F., Renieri, A., Gao, P., Shen, X., Timpanaro, I. S., Kenna, K. P., Baillie, J. K., Davis, M. M., Tsao, P. S. & Snyder, M. P., 17 Aug 2022, In: Cell Systems. 13, 8, p. 598-614.e6

Research output: Contribution to journal › Article › peer-review

Open Access

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Clinical characteristics with inflammation profiling of long COVID and association with 1-year recovery following hospitalisation in the UK: a prospective observational study

PHOSP-COVID Collaborative Group, Docherty, A. B., Kerr, S., Lone, N. I., Sheikh, A., Zheng, B., Harrison, E. M. & Baillie, J. K., 1 Aug 2022, In: The Lancet Respiratory Medicine. 10, 8, p. 761-775

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Mapping of SARS-CoV-2 IgM and IgG in gingival crevicular fluid: antibody dynamics and linkage to severity of COVID-19 in hospital inpatients

for ISARIC4C Investigators & Baillie, J. K., 1 Aug 2022, In: Journal of Infection. 85, 2, p. 152-160

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Open Access

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ISARIC-COVID-19 dataset: A Prospective, Standardized, Global Dataset of Patients Hospitalized with COVID-19

The Western Australian COVID-19 Research Response, Long COVID India Etienne, Mazankowski Heart Institute Ryckaert, ISARIC Collaborator Korten, ISARIC Clinical Characterization Group, Garcia-Gallo, E., Merson, L., Kennon, K., Kelly, S., Citarella, B. W., Fryer, D. V., Shrapnel, S., Lee, J., Duque, S., Fuentes, Y. V., Balan, V., Smith, S., Wei, J., Gonçalves, B. P., Russell, C. D., & 11 othersSigfrid, L., Dagens, A., Olliaro, P. L., Baruch, J., Kartsonaki, C., Dunning, J., Rojek, A., Rashan, A., Beane, A., Murthy, S. & Reyes, L. F., 30 Jul 2022, In: Scientific Data. 9, 1, p. 454 454.

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Open Access

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A first update on mapping the human genetic architecture of COVID-19

COVID-19 Host Genetics Initiative, 8 Jul 2022, In: Nature. 608, 7921, p. E1-E10

Research output: Contribution to journal › Article › peer-review

Open Access

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Kenneth Baillie

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