Personal profile
Biography
I am currently the senior computing officer for research at GAIL, the Generative AI Lab of the University of Edinburgh. I support users in their research workflows, also using Kubernetes to fairly allocate GPU capacity.
Previously:
AI coordinator for the AIM-CISC project: Artificial Intelligence and Multimorbidity: Clustering in Individuals, Space and Clinical Context (funded by NIHR UK from 2021 to 2024 with number 202639)
Data scientist at the Edinburgh Parallel Computing Centre, University of Edinburgh
Undergraduate and postgraduate teaching coordinator for statistics and R programming at the Psychology department, University of Edinburgh
Researcher for epigenome-wide DNA methylation data analysis of Paget's disease of bones at the Institute for Genomic and Molecular Medicine, Western General Hospital, Edinburgh, UK.
Researcher for machine learning prediction of enzyme function and mechanism and active and guided learning for molecular biology curation. At the universities of St Andrews and Edinburgh.
Skills: Machine learning, deep and traditional, statistics, NLP, LLM applications and LLM-supported coding, Python, R, Java, SQL, Kubernetes, Docker.
Education/Academic qualification
Doctor in Philosophy, University of Edinburgh
Award Date: 1 Jan 2012
Master of Informatics, University of Edinburgh
Award Date: 1 Jan 2005
Bachelor of Biomedical science, Industrial Biotechnology, Universita' degli Studi di Milano Bicocca
Award Date: 1 Jan 2000
Keywords
- QA76 Computer software
Fingerprint
- 1 Similar Profiles
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Pitfalls in understanding how multiple long-term conditions cluster: whole population and age-stratified associations in 7,490,874 people in England
Romero Moreno, G., Restocchi, V., Lone, N., Fleuriot, J. D., Palmer, J., De Ferrari, L. & Guthrie, B., 7 Feb 2025, medRxiv, p. 1-27, 27 p.Research output: Working paper › Preprint
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Effectiveness of holistic assessment-based interventions in improving outcomes in adults with multiple long-term conditions and/or frailty: an umbrella review protocol
Arakelyan, S., Lone, N. I., Anand, A., Mikula-Noble, N., J Lyall, M., De Ferrari, L., Mercer, S. W. & Guthrie, B., 1 Sept 2023, In: JBI evidence synthesis. 21, 9, p. 1863-1878 16 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Why do Sequence Signatures Predict Enzyme Mechanism? Homology versus Chemistry
Beattie, K. E., De Ferrari, L. & Mitchell, J. B. O., 29 Dec 2015, In: Evolutionary bioinformatics. 11, p. 267-74 8 p.Research output: Contribution to journal › Article › peer-review
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Enzyme mechanism prediction: A template matching problem on InterPro signature subspaces
Mussa, H. Y., De Ferrari, L. & Mitchell, J. B. O., 3 Dec 2015, In: BMC Research Notes. 8, 1, p. 1-4 4 p., 744.Research output: Contribution to journal › Article › peer-review
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Epigenetics of osteoarticular diseases: recent developments
Roberts, S. B., Wootton, E., De Ferrari, L., Albagha, O. M. & Salter, D. M., Aug 2015, In: Rheumatology international.Research output: Contribution to journal › Article › peer-review
Datasets
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Smoking coding
Romero Moreno, G. (Creator), Guthrie, B. (Creator), Palmer, J. (Creator), MacRae, C. (Creator), Galdi, P. (Creator) & De Ferrari, L. (Creator), Zenodo, 8 Jul 2024
Dataset
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Code lists of the AIM-CISC project (ACRC, University of Edinburgh)
DE FERRARI, L. (Creator), Guthrie, B. (Creator), Galdi, P. (Creator) & Romero Moreno, G. (Creator), Zenodo, 4 Jul 2024
DOI: 10.5281/zenodo.12650578, https://zenodo.org/records/12646993
Dataset
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Identification of diabetes records and implementation of algorithm to determine type of diabetes in AIM-CISC
Prigge, R. (Creator), Guthrie, B. (Creator), Palmer, J. (Creator) & De Ferrari, L. (Creator), Zenodo, 9 Jul 2024
Dataset