Personal profile

Biography

My research interests concern the molecular basis of quantitative traits, and ways to integrate different kinds of genomic data in animal genetics. During my PhD and postdoc at Linköping University, Sweden, I worked on expression quantitative trait locus analysis and population genomics in the chicken. I discovered new candidate genes for differences in bone traits and fearful behaviour between domestic chickens and Red Jungefowl, and also for adaptation in feral chickens. My postdoc at the Roslin Institute and the Swedish Unversity of Agricultural Sciences is financed by a mobility grant from the Swedish research council Formas. I am currently working on causative gene identification and deleterious load in pigs. We are working with Genus PIC to assemble a very large dataset for genomic analysis. I will use genomic methods to analyse deleterious variants in this dataset.

Qualifications

2017-present: Post-Doctoral Researcher

The Roslin Institute, UK in collaboration with & The Swedish University of Agricultural Sciences.

2016-2017: Post-Doctoral Researcher

IFM Biology, Linköping University, Sweden.

2011–2015: PhD Student

PhD student in Genetics, Linköping University, Sweden.
Thesis topic: Genomics of chicken domestication and feralisation.

2010:MSc in Engineering Biology

Linköping University.

Current Research Interests

My research interests concern the molecular basis of quantitative traits, and ways to integrate different kinds of genomic data in animal genetics.

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Collaborations and top research areas from the last five years

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  • A male-essential miRNA is key for avian sex chromosome dosage compensation

    Fallahshahroudi, A., Taemeh, S. Y., Rodríguez-Montes, L., Trost, N., Frank, D., Lafrenz, P., Koubek, J., Tellez, M., Ballantyne, M., Idoko-Akoh, A., Taylor, L., Sherman, A., Davey, M., Ma, C., Sorato, E., Johnsson, M., Grozou, C., Xue, Y., Liu, L. & Kramer, G. & 4 others, Rubin, C.-J., Cardoso Moreira, M., McGrew, M. & Kaessmann, H., Sept 2025, In: Nature. 645, 8079, p. 148-157 30 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
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  • Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology

    Gould, E., Fraser, H. S., Parker, T. H., Nakagawa, S., Griffith, S. C., Vesk, P. A., Fidler, F., Hamilton, D. G., Abbey-Lee, R. N., Abbott, J. K., Aguirre, L. A., Alcaraz, C., Aloni, I., Altschul, D., Arekar, K., Atkins, J. W., Atkinson, J., Baker, C. M., Barrett, M. & Bell, K. & 280 others, Bello, S. K., Beltrán, I., Berauer, B. J., Bertram, M. G., Billman, P. D., Blake, C. K., Blake, S., Bliard, L., Bonisoli-Alquati, A., Bonnet, T., Bordes, C. N. M., Bose, A. P. H., Botterill-James, T., Boyd, M. A., Boyle, S. A., Bradfer-Lawrence, T., Bradham, J., Brand, J. A., Brengdahl, M. I., Bulla, M., Bussière, L., Camerlenghi, E., Campbell, S. E., Campos, L. L. F., Caravaggi, A., Cardoso, P., Carroll, C. J. W., Catanach, T. A., Chen, X., Chik, H. Y. J., Choy, E. S., Christie, A. P., Chuang, A., Chunco, A. J., Clark, B. L., Contina, A., Covernton, G. A., Cox, M. P., Cressman, K. A., Crotti, M., Crouch, C. D., D’Amelio, P. B., de Sousa, A. A., Döbert, T. F., Dobler, R., Dobson, A. J., Doherty, T. S., Drobniak, S. M., Duffy, A. G., Duncan, A. B., Dunn, R. P., Dunning, J., Dutta, T., Eberhart-Hertel, L., Elmore, J. A., Elsherif, M. M., English, H. M., Ensminger, D. C., Ernst, U. R., Ferguson, S. M., Fernandez-Juricic, E., Ferreira-Arruda, T., Fieberg, J., Finch, E. A., Fiorenza, E. A., Fisher, D. N., Fontaine, A., Forstmeier, W., Fourcade, Y., Frank, G. S., Freund, C. A., Fuentes-Lillo, E., Gandy, S. L., Gannon, D. G., García-Cervigón, A. I., Garretson, A. C., Ge, X., Geary, W. L., Géron, C., Gilles, M., Girndt, A., Gliksman, D., Goldspiel, H. B., Gomes, D. G. E., Good, M. K., Goslee, S. C., Gosnell, J. S., Grames, E. M., Gratton, P., Grebe, N. M., Greenler, S. M., Griffioen, M., Griffith, D. M., Griffith, F. J., Grossman, J. J., Güncan, A., Haesen, S., Hagan, J. G., Hager, H. A., Harris, J. P., Harrison, N. D., Hasnain, S. S., Havird, J. C., Heaton, A. J., Herrera-Chaustre, M. L., Howard, T. J., Hsu, B.-Y., Iannarilli, F., Iranzo, E. C., Iverson, E. N. K., Jimoh, S. O., Johnson, D. H., Johnsson, M., Jorna, J., Jucker, T., Jung, M., Kačergytė, I., Kaltz, O., Ke, A., Kelly, C. D., Keogan, K., Keppeler, F. W., Killion, A. K., Kim, D., Kochan, D. P., Korsten, P., Kothari, S., Kuppler, J., Kusch, J. M., Lagisz, M., Lalla, K. M., Larkin, D. J., Larson, C. L., Lauck, K. S., Lauterbur, M. E., Law, A., Léandri-Breton, D.-J., Lembrechts, J. J., L’Herpiniere, K., Lievens, E. J. P., de Lima, D. O., Lindsay, S., Luquet, M., MacLeod, R., Macphie, K. H., Magellan, K., Mair, M. M., Malm, L. E., Mammola, S., Mandeville, C. P., Manhart, M., Manrique-Garzon, L. M., Mäntylä, E., Marchand, P., Marshall, B. M., Martin, C. A., Martin, D. A., Martin, J. M., Martinig, A. R., McCallum, E. S., McCauley, M., McNew, S. M., Meiners, S. J., Merkling, T., Michelangeli, M., Moiron, M., Moreira, B., Mortensen, J., Mos, B., Muraina, T. O., Murphy, P. W., Nelli, L., Niemelä, P., Nightingale, J., Nilsonne, G., Nolazco, S., Nooten, S. S., Novotny, J. L., Olin, A. B., Organ, C. L., Ostevik, K. L., Palacio, F. X., Paquet, M., Parker, D. J., Pascall, D. J., Pasquarella, V. J., Paterson, J. H., Payo-Payo, A., Pedersen, K. M., Perez, G., Perry, K. I., Pottier, P., Proulx, M. J., Proulx, R., Pruett, J. L., Ramananjato, V., Randimbiarison, F. T., Razafindratsima, O. H., Rennison, D. J., Riva, F., Riyahi, S., Roast, M. J., Rocha, F. P., Roche, D. G., Román-Palacios, C., Rosenberg, M. S., Ross, J., Rowland, F. E., Rugemalila, D., Russell, A. L., Ruuskanen, S., Saccone, P., Sadeh, A., Salazar, S. M., Sales, K., Salmón, P., Sánchez-Tójar, A., Santos, L. P., Santostefano, F., Schilling, H. T., Schmidt, M., Schmoll, T., Schneider, A. C., Schrock, A. E., Schroeder, J., Schtickzelle, N., Schultz, N. L., Scott, D. A., Scroggie, M. P., Shapiro, J. T., Sharma, N., Shearer, C. L., Simón, D., Sitvarin, M. I., Skupien, F. L., Slinn, H. L., Smith, G. P., Smith, J. A., Sollmann, R., Whitney, K. S., Still, S. M., Stuber, E. F., Sutton, G. F., Swallow, B., Taff, C. C., Takola, E., Tanentzap, A. J., Tarjuelo, R., Telford, R. J., Thawley, C. J., Thierry, H., Thomson, J., Tidau, S., Tompkins, E. M., Tortorelli, C. M., Trlica, A., Turnell, B. R., Urban, L., Van de Vondel, S., van der Wal, J. E. M., Van Eeckhoven, J., van Oordt, F., Vanderwel, K. M., Vanderwel, M. C., Vanderwolf, K. J., Vélez, J., Vergara-Florez, D. C., Verrelli, B. C., Vieira, M. V., Villamil, N., Vitali, V., Vollering, J., Walker, J., Walker, X. J., Walter, J. A., Waryszak, P., Weaver, R. J., Wedegärtner, R. E. M., Weller, D. L. & Whelan, S., 6 Feb 2025, In: BMC Biology. 23, 1, 36 p., 35.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    File
  • Building in vitro tools for livestock genomics: chromosomal variation within the PK15 cell line

    Johnsson, M., Hickey, J. M. & Jungnickel, M. K., 11 Jan 2024, (E-pub ahead of print) In: BMC Genomics. 25, 1, p. 1-11 11 p., 49.

    Research output: Contribution to journalArticlepeer-review

    Open Access
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  • Genetic markers associated with bone composition in Rhode Island Red laying hens

    Sallam, M., Wilson, P. W., Andersson, B., Schmutz, M., Benavides, C., Dominguez-Gasca, N., Sanchez-Rodriguez, E., Rodriguez-Navarro, A. B., Dunn, I. C., De Koning, D.-J. & Johnsson, M., 29 Jun 2023, (E-pub ahead of print) In: Genetics Selection Evolution. 55, 1, p. 1-20 20 p., 44.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    File
  • Genetics of tibia bone properties of crossbred commercial laying hens in different housing systems

    Johnsson, M., Wall, H., Lopes Pinto, F. A., Fleming, R. H., McCormack, H. A., Benavides-Reyes, C., Dominguez-Gasca, N., Sanchez-Rodriguez, E., Dunn, I. C., Rodriguez-Navarro, A. B., Kindmark, A. & de Koning, D.-J., 1 Dec 2022, (E-pub ahead of print) In: G3: Genes | Genomes | Genetics. p. 1-29 29 p., jkac302.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    File