Research output per year
Research output per year
Personal profile
Biography
- Specialises in the field of image processing and analysis for clinical research
- My team staffs the Image Analysis Core laboratory of the Edinburgh Imaging QMRI facility joint with the Edinburgh Clinical Research Facility
- The laboratory provides specialist support to investigators accessing data from a variety of modalities including MR, CT, PET, ultrasound and retinal imaging
- Experience facilitating research that features retinal imaging and includes studies on stroke, cardiovascular disease, MS, and cognitive change with age
- Co-ordinates an interdisciplinary initiative called VAMPIRE (Vascular Assessment and Measurement Platform for Images of the REtina) - aim is efficient, semi-automatic analysis of retinal images
My research in a nutshell
Image analysis allow the identification of biomarkers to aid in diagnosis, quantify disease progress, assess treatment response and inform decision making in drug discovery. In addition it is increasingly possible to relate imaging to genetic traits in individual and population studies. My team’s expertise helps to ensure that the appropriate imaging data are acquired, interpreted and analysed correctly in order to access their full potential.
Current Research Interests
- Development of novel image processing algorithms for use in cutting-edge medical imaging and clinical research
- Multi-modal retinal scanning - fundus camera, Scanning Laser Ophthalmoscope, OCT, Auto Fluorescence
- Advance retinal analysis algorithm development - see VAMPIRE project for more details - http://vampire.computing.dundee.ac.uk/
- Retinal imaging derived biomarker identification for neurodegeneration and systemic disease
- Engaging with Industry to improve the acquisition and broadening the application of retinal imaging
Education/Academic qualification
Postgraduate Diploma, University of Edinburgh
Award Date: 1 Jan 2013
Doctor of Philosophy (PhD), University of Edinburgh
Award Date: 1 Jan 2002
Master of Science, University of Edinburgh
Award Date: 1 Jan 1998
Bachelor of Science, University of Edinburgh
Award Date: 1 Jan 1997
Keywords
- QC Physics
- Image Processing
- Image Analysis
- Clinical Research
- Medical Imaging
- Medical Physics
- Retina
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Research output
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A Review of Machine Learning Methods for Retinal Blood Vessel Segmentation and Artery/Vein Classification
VAMPIRE project, Vascular Assessment and Measurement Platform for Images of the REtina, Feb 2021, In: Medical Image Analysis. 68, 101905.Research output: Contribution to journal › Article › peer-review
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Investigation of associations between retinal microvascular parameters and albuminuria in UK Biobank: a cross-sectional case-control study
Paterson, E. N., Cardwell, C., Macgillivray, T. J., Trucco, E., Doney, A. S., Foster, P., Maxwell, A. P. & Mckay, G. J., 25 Feb 2021, In: BMC Nephrology. 22, 1Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Macular vessel density, branching complexity and foveal avascular zone size in normal tension glaucoma
Cheng, K. K. W., Tan, B. L., Brown, L., Gray, C., Bianchi, E., Dhillon, B., MacGillivray, T. & Tatham, A. J., 13 Jan 2021, (E-pub ahead of print) In: Scientific Reports. 11, 1Research output: Contribution to journal › Article › peer-review
Open AccessFile -
On the quantitative effects of compression of retinal fundus images on morphometric vascular measurements in VAMPIRE
Mookiah, M. R. K., Hogg, S., Macgillivray, T. & Trucco, E., 5 Feb 2021, (E-pub ahead of print) In: Computer methods and programs in biomedicine. 202, p. 105969Research output: Contribution to journal › Article › peer-review
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Retinal arteriolar tortuosity and fractal dimension are associated with long-term cardiovascular outcomes in people with type 2 diabetes
Sandoval Garcia, E., McLachlan, S., Price, A. H., MacGillivray, T., Strachan, M. W. J., Wilson, J. F. & Price, J. F., 23 Jun 2021, In: Diabetologia. p. 2215-2227Research output: Contribution to journal › Article › peer-review
Open AccessFile
Activities
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6th MICCAI Workshop of Ophthalmic Image Analysis
Tom MacGillivray (Advisor)
17 Oct 2019Activity: Participating in or organising an event types › Participation in workshop, seminar, course
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Looking into the eye to see the brain
Tom MacGillivray (Speaker)
7 Feb 2018Activity: Participating in or organising an event types › Public Engagement – Schools engagement
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Image processing and analysis: issues and successes
Tom MacGillivray (Assessor)
25 Jan 2018Activity: Academic talk or presentation types › Invited talk
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NHS Education for Scotland Optometry Annual Conference
Tom MacGillivray (Advisor)
1 Oct 2017Activity: Participating in or organising an event types › Participation in workshop, seminar, course
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Retinal Evaluation in Dementia
Tom MacGillivray (Participant)
15 Sep 2016Activity: Participating in or organising an event types › Participation in workshop, seminar, course
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The Scottish Collaborative Optometry-Ophthalmology Network e-research (SCONe)
MacGillivray, T. & Dhillon, B.
1/06/20 → 31/05/22
Project: Research
Datasets
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Methods to quantify and visualize venules using structural magnetic resonance imaging scans
Jochems, A. (Creator), Blair, G. (Creator), Stringer, M. (Creator), Thrippleton, M. (Creator), Clancy, U. (Creator), Chappell, F. (Creator), Brown, R. (Creator), Jaime García, D. (Creator), Hamilton, O. (Creator), Morgan, A. (Creator), Marshall, I. (Creator), Hetherington, K. (Creator), Wiseman, S. (Creator), MacGillivray, T. (Creator), Valdes Hernandez, M. (Creator), Doubal, F. (Creator) & Wardlaw, J. (Creator), Edinburgh DataShare, 21 Jan 2020
DOI: 10.7488/ds/2755
Dataset
Press / Media
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Dr Tom MacGillivray develops eye scan to pinpoint signs of heart disease
10/04/12
26 items of Media coverage
Press/Media: Research
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University researchers find simple eye test could detect Alzheimer’s onset
Tom MacGillivray, Joanna Wardlaw, Fergus Doubal & Baljean Dhillon
27/10/14
19 items of Media coverage
Press/Media: Research
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Dr Tom MacGillivray develops eye scanner that can diagnose range of diseases
10/06/15
2 items of Media coverage
Press/Media: Research