Canon Medical / RAEng Senior Research Fellow in Healthcare AI

Research output

Research output per year 2019 2021 2022 2023 2024 2024

• 21 Conference contribution
• 14 Article
• 1 Paper

Research output per year

Research output per year

Search results

• 2024

  Zero-Shot Medical Phrase Grounding with Off-the-shelf Diffusion Models

  Vilouras, K., Sanchez, P., O'neil, A. Q. & Tsaftaris, S. A., 8 Nov 2024, (E-pub ahead of print) In: IEEE Journal of Biomedical and Health Informatics. p. 1-10

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Diffusion Model 100%
  • Annotation 33%
  • Postprocessing 33%
  • Textual Feature 33%
  • Intermediate Representation 33%

• Compositionally Equivariant Representation Learning

  Liu, X., Sanchez, P., Thermos, S., O'Neil, A. Q. & Tsaftaris, S. A., 1 Jun 2024, In: IEEE Transactions on Medical Imaging. 43, 6, p. 2169-2179

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Image Segmentation 100%
  • Representation Learning 100%
  • Magnetic Resonance Imaging 100%
  • X-Ray Computed Tomography 100%
  • Compositional Structure 50%

• Metrics reloaded: recommendations for image analysis validation

  Maier-Hein, L., Reinke, A., Godau, P., Tizabi, M. D., Buettner, F., Christodoulou, E., Glocker, B., Isensee, F., Kleesiek, J., Kozubek, M., Reyes, M., Riegler, M. A., Wiesenfarth, M., Kavur, A. E., Sudre, C. H., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Rädsch, T., Acion, L., & 52 othersAntonelli, M., Bakas, S., Benis, A., Blaschko, M. B., Cardoso, M. J., Cheplygina, V., Cimini, B. A., Collins, G. S., Farahani, K., Ferrer, L., Galdran, A., van Ginneken, B., Haase, R., Hashimoto, D. A., Hoffman, M. M., Huisman, M., Jannin, P., Kahn, C. E., Kainmueller, D., Kainz, B., Karargyris, A., Karthikesalingam, A., Kofler, F., Kopp-Schneider, A., Kreshuk, A., Kurc, T., Landman, B. A., Litjens, G., Madani, A., Maier-Hein, K., Martel, A. L., Mattson, P., Meijering, E., Menze, B., Moons, K. G. M., Müller, H., Nichyporuk, B., Nickel, F., Petersen, J., Rajpoot, N., Rieke, N., Saez-Rodriguez, J., Sánchez, C. I., Shetty, S., van Smeden, M., Summers, R. M., Taha, A. A., Tiulpin, A., Tsaftaris, S. A., Van Calster, B., Varoquaux, G. & Jäger, P. F., 12 Feb 2024, (E-pub ahead of print) In: Nature Methods. 21, 2, p. 195-212

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Image Analysis 100%
  • Use Case 33%
  • Image Segmentation 33%
  • Machine Learning Technique 33%
  • Object Detection 33%

• Understanding metric-related pitfalls in image analysis validation

  Reinke, A., Tizabi, M. D., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Kavur, A. E., Rädsch, T., Sudre, C. H., Acion, L., Antonelli, M., Bakas, S., Benis, A., Buettner, F., Cardoso, M. J., Cheplygina, V., Chen, J., Christodoulou, E., Cimini, B. A., Farahani, K., Ferrer, L., & 49 othersGaldran, A., van Ginneken, B., Glocker, B., Godau, P., Hashimoto, D. A., Hoffman, M. M., Huisman, M., Isensee, F., Jannin, P., Kahn, C. E., Kainmueller, D., Kainz, B., Karargyris, A., Kleesiek, J., Kofler, F., Kooi, T., Kopp-Schneider, A., Kozubek, M., Kreshuk, A., Kurc, T., Landman, B. A., Litjens, G., Madani, A., Maier-Hein, K., Martel, A. L., Meijering, E., Menze, B., Moons, K. G. M., Müller, H., Nichyporuk, B., Nickel, F., Petersen, J., Rafelski, S. M., Rajpoot, N., Reyes, M., Riegler, M. A., Rieke, N., Saez-Rodriguez, J., Sánchez, C. I., Shetty, S., Summers, R. M., Taha, A. A., Tiulpin, A., Tsaftaris, S. A., Van Calster, B., Varoquaux, G., Yaniv, Z. R., Jäger, P. F. & Maier-Hein, L., 12 Feb 2024, (E-pub ahead of print) In: Nature Methods. 21, 2, p. 182-194

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Image Analysis 100%
  • Artificial Intelligence 100%
  • Intelligence Research 20%
  • Application Domain 20%
  • Scientific Progress 20%
• 2023

  Neural networks memorise personal information from one sample

  Hartley, J., Sanchez, P., Haider, F. & Tsaftaris, S. A., Dec 2023, In: Scientific Reports. 13, 1, p. 21366 21366.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Neural Network 100%
  • Personal Information 100%
  • Training Data 100%
  • Neural Network Model 50%
  • Patient Information 50%

• GaNDLF: A Generally Nuanced Deep Learning Framework for Scalable End-to-End Clinical Workflows in Medical Imaging

  Pati, S., Thakur, S. P., Bhalerao, M., Thermos, S., Baid, U., Gotkowski, K., Gonzalez, C., Guley, O., Hamamci, I. E., Er, S., Grenko, C., Edwards, B., Sheller, M., Agraz, J., Baheti, B., Bashyam, V., Sharma, P., Haghighi, B., Gastounioti, A., Bergman, M., & 6 othersMukhopadhyay, A., Tsaftaris, S. A., Menze, B., Kontos, D., Davatzikos, C. & Bakas, S., 16 May 2023, (E-pub ahead of print) In: Communications Engineering. 2, 23.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File
• 2022

  Survey: Leakage and Privacy at Inference Time

  Jegorova, M., Kaul, C., Mayor, C., O'Neil, A. Q., Weir, A., Murray-Smith, R. & Tsaftaris, S. A., 15 Dec 2022, (E-pub ahead of print) In: IEEE Transactions on Pattern Analysis and Machine Intelligence. p. 1-20 20 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Machine Learning 100%
  • Learning System 100%
  • Model Architecture 33%
  • Data Architecture 33%

• Adversarial Counterfactual Augmentation: Application in Alzheimer's Disease Classification

  Xia, T., Sanchez, P., Qin, C. & Tsaftaris, S. A., 30 Nov 2022, (E-pub ahead of print) In: Frontiers in Radiology.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Generative Model 100%
  • Classification Performance 33%
  • Learning Approach 33%
  • Image Analysis 33%
  • Medical Image 33%

• Cardiac aging synthesis from cross-sectional data with conditional generative adversarial networks

  Campello, V. M., Xia, T., Liu, X., Sanchez, P., Martín-isla, C., Petersen, S. E., Seguí, S., Tsaftaris, S. A. & Lekadir, K., 23 Sept 2022, In: Frontiers in Cardiovascular Medicine. 9, p. 983091

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Progression 100%
  • Preferred Option 100%
  • Deep Learning Method 100%
  • Mean Absolute Error 100%
  • Regressors 100%

• Learning disentangled representations in the imaging domain

  Liu, X., Sanchez, P., Thermos, S., O’Neil, A. Q. & Tsaftaris, S. A., Aug 2022, In: Medical Image Analysis. 80, p. 102516 1 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Annotation 100%
  • Medical Imaging 100%
  • Building-Blocks 100%
  • Representation Learning 100%
  • Computer Vision Applications 100%
• 2021

  Learning to synthesise the ageing brain without longitudinal data

  Xia, T., Chartsias, A., Wang, C. & Tsaftaris, S. A., Oct 2021, In: Medical Image Analysis. 73

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Longitudinal Data 100%
  • Alzheimer's Disease 100%
  • Sectional Data 66%
  • Face 66%
  • Realism 33%

• Learning to Segment from Scribbles using Multi-scale Adversarial Attention Gates

  Valvano, G., Leo, A. & Tsaftaris, S. A., 30 Mar 2021, (E-pub ahead of print) In: IEEE Transactions on Medical Imaging. p. 1-14 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Annotation 100%
  • Supervised Learning 25%
  • Medical Imaging 25%
  • Image Segmentation 25%
  • Multitask Learning 25%
• 2020

  Disentangle, align and fuse for multimodal and semi-supervised image segmentation

  Chartsias, A., Papanastasiou, G., Wang, C., Semple, S., Newby, D., Dharmakumar, R. & Tsaftaris, S. A., 6 Nov 2020, (E-pub ahead of print) In: IEEE Transactions on Medical Imaging. p. 1-10 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Image Segmentation 100%
  • Signal Intensity 100%
  • Image Analysis 100%
  • Image Reconstruction 100%
  • Blood Oxygenation 100%

• Pseudo-healthy synthesis with pathology disentanglement and adversarial learning

  Xia, T., Chartsias, A. & Tsaftaris, S., Aug 2020, In: Medical Image Analysis. 64, 101719.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Surrounding Tissue 100%