Darwin Tree of Life

Research output

Research output per year 2021 2021 2022 2023 2024

• 35 Article
• 1 Letter

Research output per year

Research output per year

Search results

• 2024

  A DNA barcoding framework for taxonomic verification in the Darwin Tree of Life Project

  Twyford, A. D., Beasley, J., Barnes, I., Allen, H., Azzopardi, F., Bell, D., Blaxter, M. L., Broad, G., Campos-Dominguez, L., Choonea, D., Crowley, L., Cuber, P., Cunliffe, M., Dombrowski, A., Douglas, B., Forrest, L. L., Gaya, E., Greeves, C., Griffin, C., Harley, J., & 21 othersHart, M. L., Holland, P. W. H., Hollingsworth, P. M., Januszczak, I., Jones, A., Kersey, P., Kilias, E., Lawniczak, M. K. N., Lewis, O. T., Mian, S., Minotto, A., Misra, R., Mulhair, P. O., Pereira da Conceicoa, L., Price, B. W., Salatino, S., Shaw, F., Sivell, O., Sivess, L., Uhl, R. & Woof, K., 8 Oct 2024, In: Wellcome Open Research. 9, 24 p., 339.

  Research output: Contribution to journal › Letter › peer-review

  Open Access

  File

  • Tree of Life 100%
  • DNA Barcoding 100%
  • DnaA 100%
  • Bioinformatics 100%
  • Data Interpretation 100%

• The genome sequence of a drosophilid fruit fly, Drosophila histrio (Meigen, 1830) [version 1; peer review: 3 approved]

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics team, Tree of Life Core Informatics collective & Darwin Tree of Life Consortium, 15 Jul 2024, In: Wellcome Open Research. 9, 56, 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Fruit Fly 100%
  • Arthropoda 50%
  • Genome Assembly 50%
  • Insecta 50%
  • Drosophilidae 50%
• 2023

  Ancient diversity in host-parasite interaction genes in a model parasitic nematode

  Stevens, L., Martinez-Ugalde, I., King, E., Wagah, M., Absolon, D., Bancroft, R., Gonzalez De La Rosa, P., Hall, J. L., Kieninger, M., Kloch, A., Pelan, S., Robertson, E., Pedersen, A. B., Abreu-Goodger, C., Buck, A. H. & Blaxter, M., 27 Nov 2023, In: Nature Communications. 14, 19 p., 7776.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Host Immune Response 100%
  • Parasitic Nematodes 100%
  • Host Parasite Interaction 100%
  • Haplotype 100%
  • Balancing Selection 100%

• The genome sequence of a drosophilid fruit fly, Chymomyza fuscimana (Drosophilidae) (Zetterstedt, 1838)

  Obbard, D. J., 18 Oct 2023, In: Wellcome Open Research . 8, 477, 10 p.

  Research output: Contribution to journal › Article

  Open Access

  File

  • Fruit Fly 100%
  • Drosophilidae 100%
  • Arthropoda 50%
  • Genome Assembly 50%
  • Insecta 50%

• The genome sequence of the Silver-spotted Skipper, Hesperia comma (Linnaeus, 1758) [version 1; peer review: 1 approved]

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective & Darwin Tree of Life Consortium, 12 Oct 2023, In: Wellcome Open Research. 8, 457, 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Mitochondrial Genome 100%
  • Insecta 100%

• The genome sequence of a drosophilid fruit fly, Drosophila funebris (Fabricius, 1789)[version 1; peer review: awaiting peer review]

  Obbard, D. J., 10 Oct 2023, In: Wellcome Open Research. 8, 437, 10 p.

  Research output: Contribution to journal › Article

  Open Access

  File

  • Fruit Fly 100%
  • X Chromosome 50%
  • Diptera 50%
  • Y Chromosome 50%
  • Drosophilidae 50%

• The genome sequence of the Dingy Skipper, Erynnis tages (Linnaeus, 1758) [version 1; peer review: awaiting peer review]

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective & Darwin Tree of Life Consortium, 31 Aug 2023, In: Wellcome Open Research. 8, 372, 10 p.

  Research output: Contribution to journal › Article

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Mitochondrial Genome 100%
  • Insecta 100%

• The genome sequence of the Arctic Skipper, Carterocephalus palaemon (Pallas, 1771) [version 1; peer review: awaiting peer review]

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective & Darwin Tree of Life Consortium, 30 Aug 2023, In: Wellcome Open Research. 8, 369, 10 p.

  Research output: Contribution to journal › Article

  Open Access

  File

  • Palaemon 100%
  • Lepidoptera 50%
  • Sex Chromosome 50%
  • Mitochondrial Genome 50%
  • Insecta 50%

• The genome sequence of a drosophilid fruit fly, Hirtodrosophila cameraria (Haliday, 1833) [version 1; peer review: awaiting peer review]

  Obbard, D. J., 22 Aug 2023, In: Wellcome Open Research. 8, 361, 9 p.

  Research output: Contribution to journal › Article

  Open Access

  File

  • Fruit Fly 100%
  • Arthropoda 50%
  • Genome Assembly 50%
  • Insecta 50%
  • Drosophilidae 50%

• The genome sequence of the Brown Argus, Aricia agestis (Denis & Schiffermüller, 1775) [version 1; peer review: 2 approved]

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective & Darwin Tree of Life Consortium, 10 Aug 2023, In: Wellcome Open Research. 8, 336, 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Arthropoda 100%
  • Sex Chromosome 100%
  • Genome Assembly 100%
  • Insecta 100%
  • Lycaenidae 100%

• The genome sequence of the Mazarine Blue, Cyaniris semiargus (Rottemburg, 1775) [version 1; peer review: 1 approved]

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective & Darwin Tree of Life Consortium, 24 Apr 2023, In: Wellcome Open Research. 8, 181, 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Arthropoda 100%
  • Sex Chromosome 100%
  • Genome Assembly 100%
  • Insecta 100%
  • Lycaenidae 100%

• The genome sequence of the Chalkhill Blue, Lysandra coridon (Poda, 1761)

  Vila, R., Lohse, K., Hayward, A., Laetsch, D. R. & Wright, C., 12 Apr 2023, In: Wellcome Open Research. 8, 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Mitochondrial Genome 100%
  • Insecta 100%
• 2022

  The genome sequence of the silver-studded blue, Plebejus argus (Linnaeus, 1758)

  Hayward, A., Lohse, K., Laetsch, D. R., Vila, R. & Taluy, E., 23 Dec 2022, In: Wellcome Open Research. 7, 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Arthropoda 100%
  • Sex Chromosome 100%
  • Genome Assembly 100%
  • Insecta 100%
  • Lycaenidae 100%

• The genome sequence of the Arran brown, Erebia ligea (Linnaeus, 1758)

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, Lohse, K., Hayward, A., Laetsch, D. R., Vila, R. & Lucek, K., 13 Oct 2022, In: Wellcome Open Research. 7, 9 p., 256.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Arthropoda 100%
  • Nymphalidae 100%
  • Sex Chromosome 100%
  • Genome Assembly 100%
  • Insecta 100%

• The genome sequence of the orange-tip butterfly, Anthocharis cardamines (Linnaeus, 1758)

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, Ebdon, S., Bisschop, G., Lohse, K., Saccheri, I. & Davies, J. A., 13 Oct 2022, In: Wellcome Open Research. 7, 10 p., 260.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Cardamine 100%
  • Sweet orange 100%
  • Arthropoda 50%
  • Sex Chromosome 50%
  • Genome Assembly 50%

• The genome sequence of the Adonis blue, Lysandra bellargus (Rottemburg, 1775)

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective & Darwin Tree of Life Consortium, 12 Oct 2022, In: Wellcome Open Research. 7, 10 p., 255.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Adonis 100%

• The genome sequence of the wall brown, Lasiommata megera (Linnaeus, 1767)

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, Lohse, K. & Wright, C., 12 Oct 2022, In: Wellcome Open Research. 7, 8 p., 230.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Mitochondrial Genome 100%
  • Insecta 100%
  • Arthropoda 50%

• The genome sequence of the wood white butterfly, Leptidea sinapis (Linnaeus, 1758)

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, Lohse, K., Höök, L., Näsvall, K. & Backström, N., 12 Oct 2022, In: Wellcome Open Research. 7, 254, 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Sinapis 100%
  • Lepidoptera 50%
  • Sex Chromosome 50%
  • Insecta 50%
  • Pieridae 50%

• The genome sequence of the scotch argus butterfly, Erebia aethiops (Esper, 1777)

  Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, Lohse, O. & Lohse, K., 19 Aug 2022, In: Wellcome Open Research. 7, 12 p., 217.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Scotch Whisky 100%
  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Mitochondrial Genome 100%
  • Insecta 100%

• The genome sequence of the marbled white butterfly, Melanargia galathea (Linnaeus, 1758)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & The Darwin Tree of Life Project Consortium, 4 Apr 2022, (E-pub ahead of print) In: Wellcome Open Research. 7, 123, 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Arthropoda 100%
  • Nymphalidae 100%
  • Sex Chromosome 100%
  • Genome Assembly 100%
  • Insecta 100%

• The genome sequence of the grizzled skipper, Pyrgus malvae (Linnaeus, 1758)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium & The Darwin Tree of Life Project Consortium, 29 Mar 2022, In: Wellcome Open Research. 7, p. 1-11 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%

• The genome sequence of the black-veined white butterfly, Aporia crataegi (Linnaeus, 1758)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 8 Mar 2022, In: Wellcome Open Research. 7, 10 p., 81.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%
  • Pieridae 100%
  • Arthropoda 50%

• The genome sequence of the small pearl-bordered fritillary butterfly, Boloria selene (Schiffermüller, 1775)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 4 Mar 2022, In: Wellcome Open Research. 7, 76, 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%

• Sequence locally, think globally: The Darwin tree of life project

  The Darwin Tree of Life Project Consortium, Barnes, I., Berriman, M., Broad, G., Durbin, R., Flicek, P., Gaya, E., Hall, N., Hart, M., Holland, P., Hollingsworth, P., Howe, K., Kersey, P., Lawniczak, M. K. N., Lewis, O., Mieszkowska, N., Richards, T., Twyford, A. D. & Wilson, W., 25 Jan 2022, In: Proceedings of the National Academy of Sciences (PNAS). 119, 4, 7 p., e2115642118.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Tree of Life 100%
  • Biodiversity 100%
  • Botanical Garden 50%
  • Genomics 33%

• The genome sequence of the painted lady, Vanessa cardui Linnaeus 1758

  The Darwin Tree of Life Project Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 19 Jan 2022, In: Wellcome Open Research. 6, 324, 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Carduus 100%
• 2021

  The genome sequence of the heath fritillary, Melitaea athalia (Rottemburg, 1775)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium & The Darwin Tree of Life Project Consortium, 10 Nov 2021, In: Wellcome Open Research. 6, 12 p., 304.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%
  • Arthropoda 33%
  • Nymphalidae 33%

• The genome sequence of the meadow brown, Maniola jurtina (Linnaeus, 1758)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium & The Darwin Tree of Life Project Consortium, 5 Nov 2021, (E-pub ahead of print) In: Wellcome Open Research. 6, 13 p., 296.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%

• The genome sequence of the small copper, Lycaena phlaeas (Linnaeus, 1760)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 3 Nov 2021, (E-pub ahead of print) In: Wellcome Open Research. 6, 14 p., 294.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%

• The genome sequences of the male and female green-veined white, Pieris napi (Linnaeus, 1758)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 26 Oct 2021, (E-pub ahead of print) In: Wellcome Open Research. 6, 11 p., 288.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Pieris napi 100%
  • Pieridae 50%

• The genome sequence of the speckled wood butterfly, Pararge aegeria (Linnaeus, 1758)

  The Darwin Tree of Life Project Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 25 Oct 2021, (E-pub ahead of print) In: Wellcome Open Research. 6, 287, 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Pararge aegeria 100%
  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%
  • Arthropoda 50%

• The genome sequence of the small white, Pieris rapae (Linnaeus, 1758)

  The Darwin Tree of Life Project Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 15 Oct 2021, (E-pub ahead of print) In: Wellcome Open Research. 6, 273, 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Pieris rapae 100%

• The genome sequence of the Glanville fritillary, Melitaea cinxia (Linnaeus, 1758)

  Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium & The Darwin Tree of Life Project Consortium, 13 Oct 2021, (E-pub ahead of print) In: Wellcome Open Research. 6, 12 p., 266.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%

• The genome sequence of the European peacock butterfly, Aglais io (Linnaeus, 1758)

  The Darwin Tree of Life Project Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme & Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, 12 Oct 2021, (E-pub ahead of print) In: Wellcome Open Research. 6, 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Peafowl 100%
  • Arthropoda 50%
  • Nymphalidae 50%
  • Sex Chromosome 50%
  • Genome Assembly 50%

• The genome sequence of the large white, Pieris brassicae (Linnaeus, 1758)

  The Darwin Tree of Life Project Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 12 Oct 2021, In: Wellcome Open Research. 6, 262, 11 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Pieris brassicae 100%
  • Pieridae 50%

• The genome sequence of the large tortoiseshell, Nymphalis polychloros (Linnaeus, 1758)

  The Darwin Tree of Life Project Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 16 Sept 2021, (E-pub ahead of print) In: Wellcome Open Research. 6, 238, 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Nymphalis 100%
  • Lepidoptera 100%
  • Sex Chromosome 100%
  • Insecta 100%
  • Arthropoda 50%

• The genome sequence of the small tortoiseshell butterfly, Aglais urticae (Linnaeus, 1758)

  The Darwin Tree of Life Project Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective & Tree of Life Core Informatics collective, Darwin Tree of Life Consortium, 14 Sept 2021, In: Wellcome Open Research. 6, 14 p., 233.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  File

  • Aglais Urticae 100%
  • Urtica 100%
  • Arthropoda 50%
  • Nymphalidae 50%
  • Sex Chromosome 50%