Edinbugrh Soft Matter and Statistical Physics Programme Grant Renewal

2017

Assembly of microbial communities in replicate nutrient-cycling model ecosystems follows divergent trajectories, leading to alternate stable states

Pagaling, E., Vassileva, K., Mills, C., Bush, T., Blythe, R., Schwarz-Linek, J., Strathdee, F., Allen, R. & Free, A., 5 Jul 2017, In: Environmental Microbiology. 19, 8, p. 3374-3386

Research output: Contribution to journal › Article › peer-review

Open Access

File

2013

Denaturing gradient gel electrophoresis

Strathdee, F. & Free, A., 17 Jul 2013, DNA Electrophoresis: Methods and Protocols. Makovets, S. (ed.). Humana Press, Vol. 1054. p. 145-157 (Methods in Molecular Biology; vol. 1054).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2012

Quantum widening of a causal dynamical triangulations universe

Bogacz, L., Burda, Z. & Waclaw, B., 15 Nov 2012, In: Physical Review D. 86, 10, 15 p., 104015.

Research output: Contribution to journal › Article › peer-review

Differential Dynamic Microscopy: A High-Throughput Method for Characterizing the Motility of Microorganisms

Martinez, V. A., Besseling, R., Croze, O. A., Tailleur, J., Reufer, M., Schwarz-Linek, J., Wilson, L. G., Bees, M. A. & Poon, W. C. K., 17 Oct 2012, In: Biophysical Journal. 103, 8, p. 1637-1647 11 p.

Research output: Contribution to journal › Article › peer-review

Open Access

File

Colloidal particles at the interface between an isotropic liquid and a chiral liquid crystal

Pawsey, A., Lintuvuori, J., Wood, T., Thijssen, J., Marenduzzo, D. & Clegg, P., 28 Aug 2012, In: Soft Matter. 8, 32, p. 8422-8428 7 p.

Research output: Contribution to journal › Article › peer-review

Diffusive transport without detailed balance in motile bacteria: does microbiology need statistical physics?

Cates, M. E., Apr 2012, In: Reports on Progress in Physics. 75, 4, p. - 14 p., 042601.

Research output: Contribution to journal › Literature review › peer-review

Anisotropic dynamics of the tenuous gel in a liquid crystal-nanoparticle composite

van't Zand, D. D., Chushkin, Y., Belkoura, L., Lobo, C., Strey, R., Lyakhova, K. & Clegg, P., 21 Mar 2012, In: Soft Matter. 8, 15, p. 4062-4066 5 p.

Research output: Contribution to journal › Article › peer-review

Non-crystalline colloidal clusters in two dimensions: size distributions and shapes

Janai, E., Schofield, A. B. & Sloutskin, E., 14 Mar 2012, In: Soft Matter. 10, p. 2924-2929 6 p.

Research output: Contribution to journal › Article › peer-review

Phase separation and rotor self-assembly in active particle suspensions

Schwarz-Linek, J., Valeriani, C., Cacciuto, A., Cates, M. E., Marenduzzo, D., Morozov, A. N. & Poon, W. C. K., 13 Mar 2012, In: Proceedings of the National Academy of Sciences (PNAS). 109, 11, p. 4052-4057 6 p.

Research output: Contribution to journal › Article › peer-review

Understanding the Low-Frequency Quasilocalized Modes in Disordered Colloidal Systems

Tan, P., Xu, N., Schofield, A. B. & Xu, L., 2 Mar 2012, In: Physical Review Letters. 108, p. 095501-1 095501-5 5 p., 095501.

Research output: Contribution to journal › Article › peer-review

Thermodynamic interpretation of soft glassy rheology models

Sollich, P. & Cates, M. E., Mar 2012, In: Physical Review E. 85, 3, 8 p., 031127.

Research output: Contribution to journal › Article › peer-review

Field-induced breakup of emulsion droplets stabilized by colloidal particles

Kim, E. G., Stratford, K., Clegg, P. S. & Cates, M. E., 24 Feb 2012, In: Physical Review E. 85, 2, p. - 4 p., 020403.

Research output: Contribution to journal › Article › peer-review

Differential Dynamic Microscopy for Anisotropic Colloidal Dynamics: Langmuir

Reufer, M., Martinez, V. A., Schurtenberger, P. & Poon, W. C. K., 10 Feb 2012, In: Langmuir. 28, 10, p. 4618-4624 7 p.

Research output: Contribution to journal › Article › peer-review

Simple Model for the Deformation-Induced Relaxation of Glassy Polymers

Fielding, S. M., Larson, R. G. & Cates, M. E., 25 Jan 2012, In: Physical Review Letters. 108, 4, p. - 5 p., 048301.

Research output: Contribution to journal › Article › peer-review

On measuring colloidal volume fractions

Poon, W. C. K., Weeks, E. R. & Royall, C. P., 2012, In: Soft Matter. 8, 1, p. 21-30 10 p.

Research output: Contribution to journal › Literature review › peer-review

Rheology of lamellar liquid crystals in two and three dimensions: a simulation study

Henrich, O., Stratford, K., Marenduzzo, D., Coveney, P. V. & Cates, M. E., 2012, In: Soft Matter. 8, 14, p. 3817-3831 15 p.

Research output: Contribution to journal › Article › peer-review

Schematic mode coupling theory of glass rheology: single and double step strains

Voigtmann, T., Brader, J. M., Fuchs, M. & Cates, M. E., 2012, In: Soft Matter. 8, 15, p. 4244-4253 10 p.

Research output: Contribution to journal › Article › peer-review

2011

Self-Assembly and Nonlinear Dynamics of Dimeric Colloidal Rotors in Cholesterics

Lintuvuori, J. S., Stratford, K., Cates, M. & Marenduzzo, D., 23 Dec 2011, In: Physical Review Letters. 107, 26, p. - 4 p., 267802.

Research output: Contribution to journal › Article › peer-review

Fluid suspensions of colloidal ellipsoids: Direct structural measurements

Cohen, A. P., Janai, E., Mogilko, E., Schofield, A. B. & Sloutskin, E., 2 Dec 2011, In: Physical Review Letters. 107, 23

Research output: Contribution to journal › Article › peer-review

Bistable Defect Structures In Blue Phase Devices

Tiribocchi, A., Gonnella, G., Marenduzzo, D., Orlandini, E. & Salvadore, F., 1 Dec 2011, In: Physical Review Letters. 107, 23, p. - 5 p., 237803.

Research output: Contribution to journal › Article › peer-review

The MOLDY short-range molecular dynamics package

Ackland, G. J., D'Mellow, K., Daraszewicz, S. L., Hepburn, D. J., Uhrin, M. & Stratford, K., Dec 2011, In: Computer Physics Communications. 182, 12, p. 2587-2604 18 p.

Research output: Contribution to journal › Article › peer-review

Hindered Coarsening of a Phase-Separating Microemulsion Due to Dispersed Colloidal Particles

van't Zand, D. D., Schofield, A. B., Thijssen, J. H. J. & Clegg, P. S., 15 Nov 2011, In: Langmuir. 27, 22, p. 13436-13443 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

File

Diffusion with optimal resetting

Evans, M. R. & Majumdar, S. N., 11 Oct 2011, In: Journal of Physics A: Mathematical and Theoretical. 44, 43, 15 p., 435001.

Research output: Contribution to journal › Article › peer-review

File

A Self-Quenched Defect Glass in a Colloid-Nematic Liquid Crystal Composite

Wood, T., Lintuvuori, J., Schofield, A. B., Marenduzzo, D. & Poon, W., 7 Oct 2011, In: Science. 334, 6052, p. 79-83 5 p.

Research output: Contribution to journal › Article › peer-review

Shearing self-propelled suspensions: Arrest of coarsening and suppression of giant density fluctuations

Saracco, G. P., Gonnella, G., Marenduzzo, D. & Orlandini, E., 29 Sept 2011, In: Physical Review E. 84, 3, p. - 5 p., 031930.

Research output: Contribution to journal › Article › peer-review

Monte Carlo and event-driven dynamics of Brownian particles with orientational degrees of freedom

Romano, F., De Michele, C., Marenduzzo, D. & Sanz, E., 28 Sept 2011, In: The Journal of Chemical Physics. 135, 12, p. - 7 p., 124106.

Research output: Contribution to journal › Article › peer-review

How do (fluorescent) surfactants affect particle-stabilized emulsions?

Thijssen, J. H. J., Schofield, A. B. & Clegg, P. S., 21 Sept 2011, In: Soft Matter. 7, 18, p. 7965-7968 4 p.

Research output: Contribution to journal › Article › peer-review

Migration of Chemotactic Bacteria in Soft Agar: Role of Gel Concentration

Croze, O. A., Ferguson, G. P., Cates, M. E. & Poon, W. C. K., 3 Aug 2011, In: Biophysical Journal. 101, 3, p. 525-534 10 p.

Research output: Contribution to journal › Article › peer-review

Ion mobility mass spectrometry for peptide analysis

Harvey, S. R., MacPhee, C. E. & Barran, P. E., Aug 2011, In: Methods in Molecular Biology. 54, 4, p. 454-461 8 p.

Research output: Contribution to journal › Literature review › peer-review

Does Gravity Cause Load-Bearing Bridges in Colloidal and Granular Systems?

Jenkins, M. C., Haw, M. D., Barker, G. C., Poon, W. & Egelhaaf, S. U., 15 Jul 2011, In: Physical Review Letters. 107, 3, p. - 4 p., 038302.

Research output: Contribution to journal › Article › peer-review

Inversion of particle-stabilized emulsions of partially miscible liquids by mild drying of modified silica particles

White, K. A., Schofield, A. B., Wormald, P., Tavacoli, J., Binks, B. P. & Clegg, P. S., 1 Jul 2011, In: Journal of Colloid and Interface Science. 359, 1, p. 126-135 10 p.

Research output: Contribution to journal › Article › peer-review

Polymers with spatial or topological constraints: Theoretical and computational results

Micheletti, C., Marenduzzo, D. & Orlandini, E., Jul 2011, In: Physics Reports. 504, 1, p. 173 73 p.

Research output: Contribution to journal › Literature review › peer-review

Modelling thermal fluctuations in non-ideal fluids with the lattice Boltzmann method

Gross, M., Adhikari, R., Cates, M. E. & Varnik, F., 13 Jun 2011, In: Philosophical Transactions A: Mathematical, Physical and Engineering Sciences. 369, 1944, p. 2274-2282 9 p.

Research output: Contribution to journal › Article › peer-review

Novel, Robust, and Versatile Bijels of Nitromethane, Ethanediol, and Colloidal Silica: Capsules, Sub-Ten-Micrometer Domains, and Mechanical Properties

Tavacoli, J., Thijssen, J. H. J., Schofield, A. B. & Clegg, P. S., 7 Jun 2011, In: Advanced Functional Materials. 21, 11, p. 2020-2027 8 p.

Research output: Contribution to journal › Article › peer-review

Crystallization Mechanism of Hard Sphere Glasses

Sanz, E., Valeriani, C., Zaccarelli, E., Poon, W. C. K., Pusey, P. N. & Cates, M. E., 24 May 2011, In: Physical Review Letters. 106, 21, p. - 4 p., 215701.

Research output: Contribution to journal › Article › peer-review

Crystallization and aging in hard-sphere glasses

Valeriani, C., Sanz, E., Zaccarelli, E., Poon, W. C. K., Cates, M. E. & Pusey, P. N., 18 May 2011, In: Journal of Physics: Condensed Matter. 23, 19, p. - 7 p., 194117.

Research output: Contribution to journal › Article › peer-review

Colloids in a bacterial bath: simulations and experiments

Valeriani, C., Li, M., Novosel, J., Arlt, J. & Marenduzzo, D., May 2011, In: Soft Matter. 7, 11, p. 5228-5238 11 p.

Research output: Contribution to journal › Article › peer-review

Nonlinear dynamics and rheology of active fluids: Simulations in two dimensions

Fielding, S. M., Marenduzzo, D. & Cates, M. E., 13 Apr 2011, In: Physical Review E. 83, 4, p. - 14 p., 041910.

Research output: Contribution to journal › Article › peer-review

Active soft matter

MacKintosh, F. C. & Cates, M. E., 7 Apr 2011, In: Soft Matter. 7, 7, p. 3050-3051 2 p.

Research output: Contribution to journal › Editorial › peer-review

Direct experimental evidence of growing dynamic length scales in confined colloidal liquids

Sarangapani, P. S., Schofield, A. B. & Zhu, Y., 28 Mar 2011, In: Physical Review E. 83, 3, p. - 4 p., 030502.

Research output: Contribution to journal › Article › peer-review

Structure of Blue Phase III of Cholesteric Liquid Crystals

Henrich, O., Stratford, K., Cates, M. & Marenduzzo, D., 7 Mar 2011, In: Physical Review Letters. 106, 10, p. - 4 p., 107801.

Research output: Contribution to journal › Article › peer-review

How To Prepare and Stabilize Very Small Nanoemulsions

Delmas, T., Piraux, H., Couffin, A-C., Texier, I., Vinet, F., Poulin, P., Cates, M. E. & Bibette, J., 1 Mar 2011, In: Langmuir. 27, 5, p. 1683-1692 10 p.

Research output: Contribution to journal › Article › peer-review