Research output per year
Research output per year
- 45 results
Search results
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2023
Chemically cross-linked hydrogels from repetitive protein arrays
Boni, R., Blackburn, E. A., Kleinjan, D-J., Jonaitis, M., Hewitt-Harris, F., Murdoch, M., Rosser, S., Hay, D. C. & Regan, L., 1 Sept 2023, In: Journal of Structural Biology. 215, 3, 8 p., 107981.Research output: Contribution to journal › Article › peer-review
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2022
High-throughput sequencing SELEX for the determination of DNA-binding protein specificities in vitro
Pantier, R., Chhatbar, K., Alston, G., Lee, H. Y. & Bird, A., 16 Sept 2022, In: Star Protocols. 3, 3, 21 p., 101490.Research output: Contribution to journal › Article › peer-review
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2021
Pilot scale production, extraction and purification of a thermostable phycocyanin from Synechocystis sp. PCC 6803
Puzorjov, A., Ünal, M., Wear, M. A. & McCormick, A. J., 1 Dec 2021, (E-pub ahead of print) In: Bioresource technology. 345, 10 p., 126459.Research output: Contribution to journal › Article › peer-review
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STING Nuclear Partners Contribute to Innate Immune Signalling Responses
Dixon, C., Malik, P., de las Heras, J., Saiz ros, N., Alves, F. L., Tingey, M., Gaunt, E., Richardson, A. C., Kelly, D., Goldberg, M., Towers, G. J., Yang, W., Rappsilber, J., Digard, P. & Schirmer, E. C., 28 Aug 2021, (E-pub ahead of print) In: iScience. 103055.Research output: Contribution to journal › Article › peer-review
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SALL4 controls cell fate in response to DNA base composition
Pantier, R., Chhatbar, K., Quante, T., Skourti Stathaki, K., Cholewa-Waclaw, J., Alston, G., Alexander-Howden, B., Yang Lee, H., Cook, A. G., Spruijt, C. G., Vermeulen, M., Selfridge, J. & Bird, A. P., 18 Feb 2021, In: Molecular Cell. 81, 4, p. 845-858 14 p.Research output: Contribution to journal › Article › peer-review
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2020
SCF-Fbxo42 promotes synaptonemal complex assembly by downregulating PP2A-B56
Barbosa, P., Zhaunova, L., Debilio, S., Steccanella, V., Kelly, V., Ly, T. & Ohkura, H., 31 Dec 2020, In: Journal of Cell Biology. 220, 2, 12 p., e202009167.Research output: Contribution to journal › Article › peer-review
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Anatomy of a crosslinker
Belsom, A. & Rappsilber, J., 21 Aug 2020, (E-pub ahead of print) In: Current opinion in chemical biology. 60, p. 39-46Research output: Contribution to journal › Article › peer-review
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H3K9me maintenance on a Human Artificial Chromosome is required for 3 segregation but not centromere epigenetic memory
Martins, N. M. C., Cisneros Soberanis, F., Pesenti, E., Kochanova, N., Shang, W-H., Hori, T., Nagase, T., Kimura, H., Larionov, V., Masumoto, H., Fukagawa, T. & Earnshaw, B., 24 Jul 2020, In: Journal of Cell Science. 133, jcs242610.Research output: Contribution to journal › Article › peer-review
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Spt6 is a maintenance factor for centromeric CENP-A
Bobkov, G., Huang, A., van den Berg, S. J. W., Mitra, S., Anselm, E., Lazou, V., Schunter, S., Feederle, R., Imhof, A., Lusser, A., Jansen, L. E. T. & Heun, P., 10 Jun 2020, In: Nature Communications. 11, 1, 2919.Research output: Contribution to journal › Article › peer-review
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Nucleoplasmic signals promote directed transmembrane protein import simultaneously via multiple channels of nuclear pores
Mudumbi, K. C., Czapiewski, R., Ruba, A., Junod, S. L., Li, Y., Wangxi, L., Ngo, C., Ospina, V., Schirmer, E. & Yang, W., 4 May 2020, In: Nature Communications. 2184.Research output: Contribution to journal › Article › peer-review
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Hfq CLASH uncovers sRNA-target interaction networks linked to nutrient availability adaptation
Iosub, I., Van Nues, R., McKellar, S., Nieken, K. J., Marchioretto, M., Sy, B., Tree, J. J., Viero, G. & Granneman, S., 1 May 2020, In: eLIFE. 9, 33 p., e54655.Research output: Contribution to journal › Article › peer-review
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High density of unrepaired genomic ribonucleotides leads to Topoisomerase 1-mediated severe growth defects in absence of ribonucleotide reductase
Cerritelli, S. M., Iranzo, J., Sharma, S., Chabes, A., Crouch, R. J., Tollervey, D. & El hage, A., 18 Mar 2020, In: Nucleic Acids Research. gkaa103.Research output: Contribution to journal › Article › peer-review
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Structural basis for centromere maintenance by Drosophila CENP-A chaperone CAL1
Medina-Pritchard, B., Lazou, V., Zou, J., Byron, O., Abad Fernandez, M., Rappsilber, J., Heun, P. & Arulanandam, J., 5 Mar 2020, In: EMBO Journal. e103234.Research output: Contribution to journal › Article › peer-review
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2019
Spatial Genome Organization: From Development to Disease
Sivakumar, A., De Las Heras, J. I. & Schirmer, E. C., 21 Mar 2019, In: Frontiers in Cell and Developmental Biology. 7, 12 p., 18.Research output: Contribution to journal › Review article › peer-review
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Host Vesicle Fusion Protein VAPB Contributes to the Nuclear Egress Stage of Herpes Simplex Virus Type-1 (HSV-1) Replication
Saiz-Ros, N., Czapiewski, R., Epifano, I., Stevenson, A., Swanson, S. K., Dixon, C. R., Zamora, D. B., McElwee, M., Vijayakrishnan, S., Richardson, C. A., Dong, L., Kelly, D. A., Pytowski, L., Goldberg, M. W., Florens, L., Graham, S. V. & Schirmer, E. C., 3 Feb 2019, In: Cells. 8, 2, 28 p.Research output: Contribution to journal › Article › peer-review
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A fast and tuneable auxin-inducible degron for depletion of target proteins in budding yeast
Mendoza-Ochoa, G. I., Barrass, J. D., Terlouw, B. R., Maudlin, I. E., de Lucas, S., Sani, E., Aslanzadeh, V., Reid, J. A. E. & Beggs, J. D., 1 Jan 2019, In: Yeast. 36, 1, p. 75-81 7 p.Research output: Contribution to journal › Article › peer-review
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2018
Posttranscriptional Regulation of 14q32 microRNAs by RNA Binding Proteins CIRBP and HADHB during Vascular Regeneration after Ischemia: Posttranscriptional regulation of 14q32 microRNAs
Downie Ruiz Velasco, A., Welten, S. M. J., Goossens, E. A. C., Quax, PH. A. ., Rappsilber, J., Michlewski, G. & Nossent, A. Y., 6 Dec 2018, (E-pub ahead of print) In: Molecular Therapy.Research output: Contribution to journal › Article › peer-review
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Regulated reconstitution of spindle checkpoint arrest and silencing through chemically induced dimerisation, in vivo
Amin, P., Chafraidh, S. S. N., Leontiou, I. & Hardwick, K. G., 4 Oct 2018, In: Journal of Cell Science. 132, 4, jcs.219766.Research output: Contribution to journal › Article › peer-review
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A Nuclear Export Block Triggers the Decay of Newly Synthesized Polyadenylated RNA
Tudek, A., Schmid, M., Makaras, M., Barrass, J. D., Beggs, J. D. & Jensen, T. H., 28 Aug 2018, In: Cell Reports. 24, 9, p. 2457-2467.e7Research output: Contribution to journal › Article › peer-review
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Tailing off: PABP and CNOT generate cycles of mRNA deadenylation
Bresson, S. & Tollervey, D., 21 Jun 2018, (E-pub ahead of print) In: Molecular Cell. 70, 6, p. 987-988 2 p.Research output: Contribution to journal › Short survey › peer-review
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Surveillance-ready transcription: Nuclear RNA decay as a default fate
Bresson, S. & Tollervey, D., 21 Mar 2018, In: Open Biology. 8, 3, 170270.Research output: Contribution to journal › Review article › peer-review
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2017
14-3-3 regulation of Ncd reveals a new mechanism for targeting 4 proteins to the spindle in oocytes
Beaven, R., Correia Nunes Bastos, R., Spanos, C., Rome, P., Cullen, C. F., Rappsilber, J., Giet, R., Goshima, G. & Ohkura, H., 2 Oct 2017, In: Journal of Cell Biology. 216, 10, p. 3029-3039 11 p.Research output: Contribution to journal › Article › peer-review
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RNA binding by the histone methyltransferases Set1 and Set2
Sayou, C., Millan-Zambrano, G., Santos-Rosa, H., Petfalski, E., Robson, S., Houseley, J., Kouzarides, T. & Tollervey, D., 1 Jul 2017, In: Molecular and Cellular Biology. 37, 14, e00165-17.Research output: Contribution to journal › Article › peer-review
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Oleic Acid Induces MiR-7 Processing through Remodeling of Pri-MiR-7/Protein Complex
Kumar, S., Downie Ruiz Velasco, A. & Michlewski, G., 2 Jun 2017, In: Journal of Molecular Biology. 429, 11, p. 1638-1649Research output: Contribution to journal › Article › peer-review
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Cross-linking mass spectrometry identifies new interfaces of Augmin required to localise the γ-Tubulin ring complex to the mitotic spindle
Chen, J. W. C., Chen, Z. A., Rogala, K. B., Metz, J., Deane, C. M., Rappsilber, J. & Wakefield, J. G., 15 May 2017, In: Biology Open. 6, 5, p. 654-663 10 p.Research output: Contribution to journal › Article › peer-review
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MeCP2 recognizes cytosine methylated tri-nucleotide and di-nucleotide sequences to tune transcription in the mammalian brain
Lagger, S., Connelly, J. C., Schweikert, G., Webb, S., Selfridge, J., Ramsahoye, B. H., Yu, M., He, C., Sanguinetti, G., Sowers, L. C., Walkinshaw, M. D. & Bird, A., 12 May 2017, In: PLoS Genetics. 13, 5, 26 p., e1006793.Research output: Contribution to journal › Article › peer-review
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Constrained release of lamina-associated enhancers and genes from the nuclear envelope during T-cell activation facilitates their association in chromosome compartments
Robson, M. I., de las Heras, J., Czapiewski, R., Sivakumar, A., Kerr, A. & Schirmer, E., 19 Apr 2017, In: Genome Research. 27, 7, p. 1126-1138 13 p.Research output: Contribution to journal › Article › peer-review
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Tissue-specific NETs alter genome organization and regulation even in a heterologous system
de las Heras, J. I., Zuleger, N., Batrakou, D. G., Czapiewski, R., Kerr, A. R. W. & Schirmer, E. C., 3 Jan 2017, In: Nucleus. p. 1-17 17 p.Research output: Contribution to journal › Article › peer-review
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2016
Global analysis of transcriptionally engaged yeast RNA polymerase III reveals extended tRNA transcripts
Turowski, T. W., Leśniewska, E., Delan-Forino, C., Sayou, C., Boguta, M. & Tollervey, D., Jul 2016, In: Genome Research. 26, 7, p. 933-944 12 p.Research output: Contribution to journal › Article › peer-review
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Tissue-specific gene repositioning by muscle nuclear membrane proteins enhances repression of critical developmental genes during myogenesis
Robson, M. I., de las Heras, J. I., Czapiewski, R., Lê Thành, P., Booth, D. G., Kelly, D. A., Webb, S., Kerr, A. R. W. & Schirmer, E. C., 16 Jun 2016, In: Molecular Cell. 62, 6, p. 834-847 14 p.Research output: Contribution to journal › Article › peer-review
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Molecular architecture of the Dam1 complex-microtubule 1 interaction
Legal, T., Zou, J., Sochaj, A. M., Rappsilber, J. & Welburn, J., 9 Mar 2016, In: Open Biology. 6, 150237.Research output: Contribution to journal › Literature review › peer-review
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Nuclear Factor 90 uses an ADAR2-like binding mode to recognize specific bases in dsRNA
Jayachandran, U., Grey, H. & Cook, A., 29 Feb 2016, In: Nucleic Acids Research. 44, 4, p. 1924-1936Research output: Contribution to journal › Article › peer-review
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Centromere Localization and Function of Mis18 Requires 'Yippee-like' Domain-Mediated Oligomerization: Crystal Structure of Mis18 ‘Yippee-like’ Domain
Subramanian, L., Medina-Pritchard, B., Barton, R., Spiller, F., Kulasegaran-Shylini, R., Radaviciute, G., Allshire, R. C. & Arulanandam, JP., 26 Feb 2016, (E-pub ahead of print) In: EMBO Reports.Research output: Contribution to journal › Article › peer-review
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Rett Syndrome: Crossing the threshold to clinical translation
Katz, D. M., Bird, A., Coenraads, M., Gray, S. J., Menon, D. U., Philpot, B. D. & Tarquinio, D. C., 1 Feb 2016, In: Trends in Neurosciences. 39, 2, p. 100-113 14 p.Research output: Contribution to journal › Article › peer-review
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2014
Tension-dependent removal of pericentromeric shugoshin is an indicator of sister chromosome biorientation
Nerusheva, O. O., Galander, S., Fernius, J., Kelly, D. & Marston, A. L., 15 Jun 2014, In: Genes & Development. 28, 12, p. 1291-1309 19 p.Research output: Contribution to journal › Article › peer-review
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2013
The molecular basis for kinesin functional specificity during mitosis
Welburn, J. P. I., Sept 2013, In: Cytoskeleton. 70, 9, p. 476-93 18 p.Research output: Contribution to journal › Article › peer-review
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Chromosome Engineering Allows the Efficient Isolation of Vertebrate Neocentromeres
Shang, W-H., Hori, T., Fukagawa, T., Toyoda, A., Fujiyama, A., Misu, S., Monma, N., Ikeo, K., Hiratani, I., Maeshima, K., Martins, N. M. C., Earnshaw, W. C. & Kimura, H., 25 Mar 2013, In: Developmental Cell. 24, 6, p. 635-648 14 p.Research output: Contribution to journal › Article › peer-review
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Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers
Fischer, L., Chen, Z. A. & Rappsilber, J., 1 Jan 2013, In: Journal of proteomics. 88, p. 120–128 9 p.Research output: Contribution to journal › Article › peer-review
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RNA helicases in splicing
Cordin, O. & Beggs, J. D., 1 Jan 2013, In: Rna biology. 10, 1, p. 83-95 13 p.Research output: Contribution to journal › Article › peer-review
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Nap1 regulates proper CENP-B binding to nucleosomes
Tachiwana, H., Miya, Y., Shono, N., Ohzeki, J-I., Osakabe, A., Otake, K., Larionov, V., Earnshaw, W. C., Kimura, H., Masumoto, H. & Kurumizaka, H., 2013, In: Nucleic Acids Research. 41, 5, p. 2869-2880 12 p.Research output: Contribution to journal › Article › peer-review
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Tissue-specific control of brain-enriched miR-7 biogenesis
Choudhury, N. R., de Lima Alves, F., de Andrés-Aguayo, L., Graf, T., Cáceres, J. F., Rappsilber, J. & Michlewski, G., 2013, In: Genes & Development. 27, 1, p. 24-38 15 p.Research output: Contribution to journal › Article › peer-review
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2012
HACking the centromere chromatin code: Insights from human artificial chromosomes
Bergmann, J. H., Larionov, V., Masumoto, H., Martins, N. M. C. & Earnshaw, W. C., Jul 2012, In: Chromosome Research . 20, 5, p. 505-519 15 p.Research output: Contribution to journal › Article › peer-review
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Dgp71WD is required for the assembly of the acentrosomal meiosis I spindle, and is not a general targeting factor for the γ-TuRC
Reschen, R., Colombie, N., Wheatley, J., Dobbelaere, J., St Johnston, D., Ohkura, H. & Raff, J., 2012, In: Biology Open. 1, 5, p. 422-429Research output: Contribution to journal › Article › peer-review
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NF45 dimerizes with NF90, Zfr and SPNR via a conserved domain that has a nucleotidyltransferase fold
Wolkowicz, U. M. & Cook, A. G., 2012, In: Nucleic Acids Research. 40, 18, p. 9356-9368Research output: Contribution to journal › Article › peer-review
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The chromosomal passenger complex activates Polo kinase at centromeres
Carmena, M., Pinson, X., Platani, M., Salloum, Z., Xu, Z., Clark, A., Macisaac, F., Ogawa, H., Eggert, U., Glover, D. M., Archambault, V. & Earnshaw, B., 2012, In: PLoS Biology. 10, 1, 15 p., e1001250.Research output: Contribution to journal › Article › peer-review
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