Putting genomic surveillance at the heart of viral epidemic response.

Status	Finished
Effective start/end date	1/08/17 → 31/07/24

Integrating dynamical modeling and phylogeographic inference to characterize global influenza circulation
Parino, F., Gustani-Buss, E., Bedford, T., Suchard, M. A., Trovão, N. S., Rambaut, A., Colizza, V., Poletto, C. & Lemey, P., 15 Mar 2024, (Unpublished) medRxiv, 22 p.
Research output: Working paper › Preprint

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Automated detection and classification of polioviruses from nanopore sequencing reads using piranha
O'Toole, Á., Colquhoun, R., Ansley, C., Troman, C., Maloney, D., Vance, Z., Akello, J., Bujaki, E., Majumdar, M., Khurshid, A., Arshad, Y., Alam, M. M., Martin, J., Shaw, A. G., Grassly, N. C. & Rambaut, A., Mar 2024, In: Virus Evolution. 10, 1, p. veae023 12 p.
Research output: Contribution to journal › Article › peer-review

Open Access
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APOBEC3 deaminase editing in mpox virus as evidence for sustained human transmission since at least 2016
O'Toole, Á., Neher, R. A., Ndodo, N., Borges, V., Gannon, B., Gomes, J. P., Groves, N., King, D. J., Maloney, D., Lemey, P., Lewandowski, K., Loman, N., Myers, R., Omah, I. F., Suchard, M. A., Worobey, M., Chand, M., Ihekweazu, C., Ulaeto, D., Adetifa, I., & 1 othersRambaut, A., 3 Nov 2023, In: Science (New York, N.Y.). 382, 6670, p. 595-600 6 p.
Research output: Contribution to journal › Article › peer-review

Open Access
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Project Details