Research output per year
Research output per year
- 11 results
Search results
-
2024
The zinc-finger transcription factor Sfp1 imprints specific classes of mRNAs and links their synthesis to cytoplasmic decay
Kelbert, M., Jordán-Pla, A., de Miguel-Jiménez, L., García-Martínez, J., Selitrennik, M., Guterman, A., Henig, N., Granneman, S., Pérez-Ortín, J. E., Chávez, S., Choder, M. & VijayRaghavan, K. (Editor), 2 Oct 2024, In: eLIFE. 12, 29 p., RP90766.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
2023
Advantages and limitations of UV cross‐linking analysis of protein–RNA interactomes in microbes
Esteban‐serna, S., Mccaughan, H. & Granneman, S., 19 Oct 2023, In: Molecular Microbiology. 120, 4, p. 477-489 13 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Temporal-iCLIP captures co-transcriptional RNA-protein interactions
Cordiner, R. A., Dou, Y., Thomsen, R., Bugai, A., Granneman, S. & Heick Jensen, T., 8 Feb 2023, In: Nature Communications. 14, 1, 16 p., 696.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
2022
RNase III-CLASH of multi-drug resistant Staphylococcus aureus reveals a regulatory mRNA 3′UTR required for intermediate vancomycin resistance
Mediati, D. G., Wong, J. L., Gao, W., Mckellar, S., Pang, C. N. I., Wu, S., Wu, W., Sy, B., Monk, I. R., Biazik, J. M., Wilkins, M. R., Howden, B. P., Stinear, T. P., Granneman, S. & Tree, J. J., 22 Jun 2022, In: Nature Communications. 13, 1, 15 p., 3558.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
The RNA-bound proteome of MRSA reveals post-transcriptional roles for helix-turn-helix DNA-binding and Rossmann-fold proteins
Chu, L.-C., Arede, P., Li, W., Urdaneta, E. C., Ivanova, I., Mckellar, S. W., Wills, J. C., Fröhlich, T., Von Kriegsheim, A., Beckmann, B. M. & Granneman, S., 24 May 2022, In: Nature Communications. 13, 1, 18 p., 2883.Research output: Contribution to journal › Article › peer-review
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2021
Puf6 primes 60S pre-ribosome nuclear export at low temperature
Gerhardy, S., Oborská-Oplová, M., Gillet, L., Börner, R., Van Nues, R., Leitner, A., Michel, E., Petkowski, J. J., Granneman, S., Sigel, R. K. O., Aebersold, R. & Panse, V. G., 4 Aug 2021, In: Nature Communications. 12, 16 p., 4696.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
diffBUM-HMM: A robust statistical modeling approach for detecting RNA flexibility changes in high-throughput structure probing data
Marangio, P., Law, K. Y. T., Sanguinetti, G. & Granneman, S., 27 May 2021, In: Genome Biology. 22, 1, 21 p., 165.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
2020
The mRNA derived MalH sRNA contributes to alternative carbon source utilization by tuning maltoporin expression in E. coli
Iosub, I., Marchioretto, M., Van Nues, R., Mckellar, S., Viero, G. & Granneman, S., 12 Oct 2020, (E-pub ahead of print) In: Rna biology. p. 914-931 18 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Monitoring protein-RNA interaction dynamics in vivo at high temporal resolution using χCRAC
Mckellar, S., Ivanova, I., van Nues, R. W., Cordiner, R. A., Worboys, W., Langford, A., Jensen, T. H. & Granneman, S., 9 May 2020, In: Journal of Visualized Experiments (JoVE). 159, 19 p., e61027.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Hfq CLASH uncovers sRNA-target interaction networks linked to nutrient availability adaptation
Iosub, I., Van Nues, R., McKellar, S., Nieken, K. J., Marchioretto, M., Sy, B., Tree, J. J., Viero, G. & Granneman, S., 1 May 2020, In: eLIFE. 9, 33 p., e54655.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
2019
Purification of cross-linked RNA-protein complexes by phenol-toluol extraction
Urdaneta, E. C., Vieira-Vieira, C. H., Hick, T., Wessels, H.-H., Figini, D., Moschall, R., Medenbach, J., Ohler, U., Granneman, S., Selbach, M. & Beckmann, B. M., 1 Mar 2019, In: Nature Communications. 10, p. 1-17 17 p., 990.Research output: Contribution to journal › Article › peer-review
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