VIRAL PHYLOGEOGRAPHY: Evolutionary reconstruction of viral spread in time and space

Project Details

StatusFinished
Effective start/end date1/10/10 → 30/09/15

Funding

  • EU government bodies: £103,593.00

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  • Genomic epidemiology reveals multiple introductions of Zika virus into the United States

    Grubaugh, N. D., Ladner, JT., Kraemer, M. UG., Dudas, G., Tan, A. L., Gangavarapu, K., Wiley, M. R., White, S., Theze, J., Magnani, D. M., Prieto, K., Reyes, D., Bingham, A., Paul, L. M., Robles-Sikisaka, R., Oliveira, G., Pronty, D., Barcellona, C. M., Metsky, H. C., Baniecki, M. L., & 49 othersBarnes, K. G., Chak, B., Freije, C. A., Gladden-Young, A., Gnirke, A., Luo, C., MacInnis, B., Matranga, C. B., Park, D. J., Qu, J., Schaffner, S. F., Christopher, T-T., West, K. L., Winnicki, S. M., Wohl, S., Yozwiak, N. L., Quick, J., Fauver, J. R., Khan, K., Brent, S. E., Reiner Jr, R. C., Lichtenberger, P. N., Ricciardi, M., Bailey, V. K., Watkins, D. I., Cone, M. R., Kopp IV, E. W., Hogan, K. N., Cannons, A. C., Jean, R., Monaghan, A. J., Garry, R. F., Loman, N. J., Faria, N. R., Porcelli, M. C., Vasquez, C., Nagle, E. R., Cummings, D. AT., Stanek, D., Rambaut, A., Sanchez-Lockhart, M., Sabeti, P. C., Gillis, L. D., Michael, S. F., Bedford, T., Pybus, O. G., Isern, S., Palacios, GF. & Andersen, K. G., 24 May 2017, (E-pub ahead of print) In: Nature. 546, p. 401–405

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File

  • Virus genomes reveal factors that spread and sustained the Ebola epidemic

    Dudas, G., Carvalho, L. M., Bedford, T., Tatem, A. J., Baele, G., Faria, N. R., Park, D. J., Ladner, JT., Arias, A., Asogun, D., Bielejec, F., Caddy, S. L., Cotten, M., D'Ambrozio, J., Dellicour, S., Di Caro, A., Diclaro II, J. W., Duraffour, S., Elmore, M. J., Fakoli, L. S., & 76 othersFaye, O., Gilbert, M. L., Gevao, S. M., Gire, S. K., Gladden-Young, A., Gnirke, A., Goba, A., Grant, D. S., Haagmans, B. L., Hiscox, J. A., Jah, U., Kugelman, JR., Liu, D., Lu, J., Malboeuf, C. M., Mate, S., Matthews, D. A., Matranga, C. B., Meredith, L. W., Qu, J., Quick, J., Pas, S. D., Phan, M. V. T., Pollakis, G., Reusken, C. B., Sanchez-Lockhart, M., Schaffner, S. F., Schieffelin, JS., Sealfon, R. S., Simon-Loriere, E., Smits, S. L., Stoecker, K., Thorne, L., Tobin, E. A., Vandi, MA., Watson, S. J., West, K., Whitmer, SL. M., Wiley, M. R., Winnicki, SM., Wohl, S., Wölfel, R., Yozwiak, N. L., Andersen, K. G., Blyden, S. O., Bolay, F. K., Carroll, M. W., Dahn, B., Diallo, B., Formenty, P., Fraser, C., Gao, G. F., Garry, R. F., Goodfellow, I., Günther, S., Happi, C., Holmes, E. C., Kargbo, B., Keïta, S., Kellam, P., Koopmans, M. P. G., Kuhn, JH., Loman, N., Magassouba, NF., Naidoo, D., Nichol, ST., Nyenswah, T., Palacios, GF., Pybus, O. G., Sabeti, P. C., Sall, A. A., Ströher, U., Wurie, I., Suchard, M. A., Lemey, P. & Rambaut, A., 12 Apr 2017, In: Nature. 544 , p. 309–315 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File

  • Emerging concepts of data integration in pathogen phylodynamics

    Baele, G., Suchard, M. A., Rambaut, A. & Lemey, P., 1 Jan 2017, In: Systematic biology. 66, p. e47–e65

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File
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