A Cryptoendolithic Community in Volcanic Glass

Aude Herrera, Charles S Cockell, Stephen Self, Mark Blaxter, Joachim Reitner, Thorsteinn Thorsteinsson, Gernot Arp, Wolfgang Dröse, Andrew G Tindle

Research output: Contribution to journalArticlepeer-review


Fluorescent in situ hybridization (FISH) and 16S rDNA analysis were used to characterize the endolithic colonization of silica-rich rhyolitic glass (obsidian) in a barren terrestrial volcanic environment in Iceland. The rocks were inhabited by a diverse eubacterial assemblage. In the interior of the rock, we identified cyanobacterial and algal 16S (plastid) sequences and visualized phototrophs by FISH, which demonstrates that molecular methods can be used to characterize phototrophs at the limits of photosynthetically active radiation (PAR). Temperatures on the surface of the dark rocks can exceed 40 degrees C but are below freezing for much of the winter. The rocks effectively shield the organisms within from ultraviolet radiation. Although PAR sufficient for photosynthesis cannot penetrate more than approximately 250 mum into the solid rock, the phototrophs inhabit cavities; and we hypothesize that by weathering the rock they may contribute to the formation of cavities in a feedback process, which allows them to acquire sufficient PAR at greater depths. These observations show how pioneer phototrophs can colonize the interior of volcanic glasses and rocks, despite the opaque nature of these materials. The data show that protected microhabitats in volcanic rocky environments would have been available for phototrophs on early Earth.
Original languageEnglish
Pages (from-to)369-381
Number of pages13
Issue number4
Publication statusPublished - Jun 2009


  • Cyanobacteria
  • DNA, Ribosomal
  • Environmental Microbiology
  • Eukaryota
  • Glass
  • Iceland
  • In Situ Hybridization, Fluorescence
  • Light
  • Microclimate
  • Microscopy
  • Phototrophic Processes
  • RNA, Ribosomal, 16S


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