A Kinetic Study of Ovalbumin Fibril Formation: The Importance of Fragmentation and End-Joining

Jason M. D. Kalapothakis, Ryan Morris, Juraj Szavits-Nossan, Kym Eden, Sam Covill, Sean Tabor, Jay Gillam, Perdita E. Barran, Rosalind J. Allen, Cait E. MacPhee*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

The ability to control the morphologies of biomolecular aggregates is a central objective in the study of self-assembly processes. The development of predictive models offers the surest route for gaining such control. Under the right conditions, proteins will self-assemble into fibers that may rearrange themselves even further to form diverse structures, including the formation of closed loops. In this study, chicken egg white ovalbumin is used as a model for the study of fibril loops. By monitoring the kinetics of self-assembly, we demonstrate that loop formation is a consequence of end-to-end association between protein fibrils. A model of fibril formation kinetics, including end-joining, is developed and solved, showing that end-joining has a distinct effect on the growth of fibrillar mass density (which can be measured experimentally), establishing a link between self-assembly kinetics and the underlying growth mechanism. These results will enable experimentalists to infer fibrillar morphologies from an appropriate analysis of self-assembly kinetic data.

Original languageEnglish
Pages (from-to)2300-2311
Number of pages12
JournalBiophysical Journal
Volume108
Issue number9
DOIs
Publication statusPublished - 5 May 2015

Keywords / Materials (for Non-textual outputs)

  • APOLIPOPROTEIN-C-II
  • AMYLOID FIBRIL
  • ALPHA-SYNUCLEIN
  • IN-VITRO
  • PROTEINS
  • DISEASE
  • PATHWAY
  • RIBBONS
  • FIBRILLIZATION
  • CRYSTALLIN

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