Adaptation to low temperatures in the wild tomato species Solanum chilense

Tetyana Nosenko*, Katharina B. Böndel, Gabriele Kumpfmüller, Wolfgang Stephan

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review


Molecular adaptation to abiotic stresses in plants is a complex process based mainly on the modifications of gene transcriptional activity and the alteration of protein–protein interactions. We used a combination of population genetic, comparative transcriptomic and plant physiology approaches to investigate the mechanisms of adaptation to low temperatures in Solanum chilense populations distributed along Andean altitudinal gradients. We found that plants from all populations have high chilling tolerance, which does not correlate with temperatures in their native habitats. In contrast, tolerance to freezing shows a significant association with altitude and temperature variables. We also observed the differences in expression patterns of cold-response genes between plants from high- and low-altitude populations. These results suggest that genetic adaptations to low temperatures evolved in high-altitude populations of S. chilense. At the transcriptional level, these adaptations may include high levels of constitutive expression of the genes encoding ICE1, the key transcription factor of the cold signalling pathway, and chloroplast ω-3 fatty acid desaturase FAD7. At the sequence level, a signature of selection associated with the adaptation to high altitudes was detected at the C-terminal part of ICE1 encoding the ACT regulatory domain.

Original languageEnglish
Pages (from-to)2853-2869
Number of pages17
JournalMolecular Ecology
Issue number12
Early online date1 Apr 2016
Publication statusPublished - 1 Jun 2016


  • adaptation
  • cold-response pathway
  • multilocus selection
  • plant population genetics
  • wild tomatoes


Dive into the research topics of 'Adaptation to low temperatures in the wild tomato species Solanum chilense'. Together they form a unique fingerprint.

Cite this