AlphaSeqOpt: software package for determining the optimum distribution of sequencing resources

John Hickey (Developer)

Research output: Non-textual formSoftware

Abstract

AlphaSeqOpt is a software package for determining the optimum distribution of sequencing resources within a population of interest. AlphaSeqOpt determines which individuals should be prioritised for sequencing and the total investment to be made in sequencing this individual. The aim of the algorithm is to capture, sequence and phase as many of the population haplotypes as possible for maximum sequence imputation ability into the rest of the population.
Original languageEnglish
Place of Publicationhttp://www.alphagenes.roslin.ed.ac.uk/alphasuite-softwares/alphaseqopt/
Media of outputOnline
Publication statusPublished - 1 Oct 2016

Keywords

  • AlphaSeqOpt
  • software
  • sequencing resources

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