ArkMAP: integrating genomic maps across species and data sources

Trevor Paterson; Andy Law

doi:10.1186/1471-2105-14-246

ArkMAP: integrating genomic maps across species and data sources

Trevor Paterson, Andy Law

Royal (Dick) School of Veterinary Studies

Research output: Contribution to journal › Article › peer-review

Abstract

The visualisation of genetic and genomic maps aligned within and between species and across data sources can be used to inform studies of genome evolution, assist genome assembly projects and aid gene discovery and identification. Whilst annotation, integration and exploration of assembled genome sequences is well supported, there are fewer tools available which can display genetic maps for less well-characterized species, and integrate these maps with annotated reference genomes to support cross species comparisons.

Original language	English
Article number	246
Number of pages	10
Journal	BMC Bioinformatics
Volume	14
DOIs	https://doi.org/10.1186/1471-2105-14-246
Publication status	Published - 2013

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10.1186/1471-2105-14-246

ArkMAP integrating genomic maps across species and data sources
© 2013 Paterson and Law; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
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Cite this

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title = "ArkMAP: integrating genomic maps across species and data sources",

abstract = "The visualisation of genetic and genomic maps aligned within and between species and across data sources can be used to inform studies of genome evolution, assist genome assembly projects and aid gene discovery and identification. Whilst annotation, integration and exploration of assembled genome sequences is well supported, there are fewer tools available which can display genetic maps for less well-characterized species, and integrate these maps with annotated reference genomes to support cross species comparisons.",

author = "Trevor Paterson and Andy Law",

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AB - The visualisation of genetic and genomic maps aligned within and between species and across data sources can be used to inform studies of genome evolution, assist genome assembly projects and aid gene discovery and identification. Whilst annotation, integration and exploration of assembled genome sequences is well supported, there are fewer tools available which can display genetic maps for less well-characterized species, and integrate these maps with annotated reference genomes to support cross species comparisons.

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ArkMAP: integrating genomic maps across species and data sources

Abstract

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