ASAR Database: An R Tool for Visual Analysis and Storage of Metagenomes

Askarbek Orakov, Nazgul Sakenova, Igor Goryanin, Anatoly Sorokin

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

The functional and taxonomic analysis is the critical step in understanding the interspecies interaction within the microbial communities. Currently, these types of analysis are run independently, which makes interpretation of the results hard and error-prone. Here we present ASAR (Advanced metagenomic Sequence Analysis in R) Database, the interactive tool and the databases for storage and exploratory analysis of the metagenomic sequencing data along three dimensions: taxonomy, function, and environmental conditions.
Original languageEnglish
Title of host publicationProceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Volume 4: BIOINFORMATICS
Place of PublicationMadeira, Portugal
Pages196-200
Number of pages5
ISBN (Electronic)978-989-758-280-6
DOIs
Publication statusE-pub ahead of print - 21 Jan 2018
EventThe 11th International Joint Conference on Biomedical Engineering Systems and Technologies - Funchal, Portugal
Duration: 19 Jan 201821 Jan 2018

Publication series

NameProceedings of the 11th International Joint Conference on Biomedical Engineering Systems and Technologies
Volume3
ISSN (Electronic)2184-4305

Conference

ConferenceThe 11th International Joint Conference on Biomedical Engineering Systems and Technologies
Abbreviated titleBIOSTEC 2018
CountryPortugal
CityFunchal
Period19/01/1821/01/18

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