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Abstract / Description of output
Protein-protein interaction (PPI) data are widely used to generate network models that aim to describe the relationships between proteins in biological systems. The fidelity and completeness of such networks is primarily limited by the paucity of protein interaction information and by the restriction of most of these data to just a few widely studied experimental organisms. In order to extend the utility of existing PPIs, computational methods can be used that exploit functional conservation between orthologous proteins across taxa to predict putative PPIs or 'interologs'. To date most interolog prediction efforts have been restricted to specific biological domains with fixed underlying data sources and there are no software tools available that provide a generalised framework for 'on-the-fly' interolog prediction.
Original language | English |
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Article number | 289 |
Number of pages | 15 |
Journal | BMC Bioinformatics |
Volume | 12 |
Issue number | July |
DOIs | |
Publication status | Published - Jul 2011 |
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Dive into the research topics of 'Bio::Homology::InterologWalk - A Perl module to build putative protein-protein interaction networks through interolog mapping'. Together they form a unique fingerprint.Projects
- 1 Finished
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A systems biological approach to elucidate local protein systhesis code in plasticity and memory - ERA SysBIO
30/08/10 → 29/08/13
Project: Research