BRASS version 3: Biological Rhythm Analysis Software Suite

Andrew Millar; Paul E Brown; David A Rand

BRASS version 3: Biological Rhythm Analysis Software Suite

Andrew Millar (Designer), Paul E Brown (Developer), David A Rand (Other)

School of Biological Sciences

Research output: Non-textual form › Software

Abstract

BRASS provides a set of highly customised but user-friendly tools for the anlaysis of circadian rhythms in timeseries data sets, particularly from plant biology (luciferase reporter gene and leaf movement assays). It uses a Microsoft Excel interface written in Visual Basic to run the FFT-NLLS and mFourfit algorithms, calculates summary statistics and plots the results in several formats.

Original language	English
Media of output	Online
Publication status	Published - 2010

Keywords / Materials (for Non-textual outputs)

data analysis
Biological Clocks
Gene Regulatory Networks
Plant science
Circadian Rhythms
non-linear analysis
TIME-SERIES

Access to Document

BRASS version 3 manual
Copyright Andrew J. Millar, 2010

http://www.amillar.org/Downloads.html

2 Finished

Modelling circadian gene regulation in Arabidopsis thaliana
Millar, A.
BBSRC
1/03/05 → 30/09/06
Project: Research
Development and distribution of genetic circuit models for seasonal reproduction
Millar, A.
BBSRC
15/02/05 → 14/08/05
Project: Research

1 Article

Quantitative analysis of regulatory flexibility under changing environmental conditions
Edwards, K. D., Akman, O. E., Knox, K., Lumsden, P. J., Thomson, A. W., Brown, P. E., Pokhilko, A., Kozma-Bognar, L., Nagy, F., Rand, D. A. & Millar, A. J., 2 Nov 2010, In: Molecular Systems Biology. 6, 11 p., 424.
Research output: Contribution to journal › Article › peer-review

Open Access
File

Cite this

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title = "BRASS version 3: Biological Rhythm Analysis Software Suite",

abstract = "BRASS provides a set of highly customised but user-friendly tools for the anlaysis of circadian rhythms in timeseries data sets, particularly from plant biology (luciferase reporter gene and leaf movement assays). It uses a Microsoft Excel interface written in Visual Basic to run the FFT-NLLS and mFourfit algorithms, calculates summary statistics and plots the results in several formats.",

keywords = "data analysis, Biological Clocks, Gene Regulatory Networks, Plant science , Circadian Rhythms, non-linear analysis, TIME-SERIES",

author = "Andrew Millar and Brown, {Paul E} and Rand, {David A}",

year = "2010",

language = "English",

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T1 - BRASS version 3

T2 - Biological Rhythm Analysis Software Suite

A2 - Millar, Andrew

A2 - Brown, Paul E

A2 - Rand, David A

PY - 2010

Y1 - 2010

N2 - BRASS provides a set of highly customised but user-friendly tools for the anlaysis of circadian rhythms in timeseries data sets, particularly from plant biology (luciferase reporter gene and leaf movement assays). It uses a Microsoft Excel interface written in Visual Basic to run the FFT-NLLS and mFourfit algorithms, calculates summary statistics and plots the results in several formats.

AB - BRASS provides a set of highly customised but user-friendly tools for the anlaysis of circadian rhythms in timeseries data sets, particularly from plant biology (luciferase reporter gene and leaf movement assays). It uses a Microsoft Excel interface written in Visual Basic to run the FFT-NLLS and mFourfit algorithms, calculates summary statistics and plots the results in several formats.

KW - data analysis

KW - Biological Clocks

KW - Gene Regulatory Networks

KW - Plant science

KW - Circadian Rhythms

KW - non-linear analysis

KW - TIME-SERIES

M3 - Software

ER -

BRASS version 3: Biological Rhythm Analysis Software Suite

Abstract

Keywords / Materials (for Non-textual outputs)

Access to Document

Fingerprint

Projects

Modelling circadian gene regulation in Arabidopsis thaliana

Development and distribution of genetic circuit models for seasonal reproduction

Research output

Quantitative analysis of regulatory flexibility under changing environmental conditions

Cite this