Coarse-graining the Dynamics of Ideal Branched Polymers

Vincent Danos, Ricardo Honorato Zimmer, Sebastián Jaramillo-Riveri, Sandro Stucki

Research output: Contribution to journalArticlepeer-review

Abstract

We define a class of local stochastic rewrite rules on directed site trees. We give a compact presentation of (often countably infinite) coarse-grained differential systems describing the dynamics of these rules in the deterministic limit, and study in a simple case finite approximations based on truncations to a certain size. We show an application to the modelling of the dynamics of sugar polymers.
Original languageEnglish
Pages (from-to)47-64
Number of pages18
JournalElectronic Notes in Theoretical Computer Science
Volume313
DOIs
Publication statusPublished - 6 May 2015

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