Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

A. M. Ramos; R. P. Crooijmans; N. A. Affara; A. J. Amaral; A. L. Archibald; J. E. Beever; C. Bendixen; C. Churcher; R. Clark; P. Dehais; M. S. Hansen; J. Hedegaard; Z. L. Hu; H. H. Kerstens; A. S. Law; H. J. Megens; D. Milan; D. J. Nonneman; G. A. Rohrer; M. F. Rothschild; T. P. Smith; R. D. Schnabel; C. P. Van Tassell; J. F. Taylor; R. T. Wiedmann; L. B. Schook; M. A. Groenen

doi:10.1371/journal.pone.0006524

Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

A. M. Ramos, R. P. Crooijmans, N. A. Affara, A. J. Amaral, A. L. Archibald, J. E. Beever, C. Bendixen, C. Churcher, R. Clark, P. Dehais, M. S. Hansen, J. Hedegaard, Z. L. Hu, H. H. Kerstens, A. S. Law, H. J. Megens, D. Milan, D. J. Nonneman, G. A. Rohrer, M. F. RothschildT. P. Smith, R. D. Schnabel, C. P. Van Tassell, J. F. Taylor, R. T. Wiedmann, L. B. Schook, M. A. Groenen

Royal (Dick) School of Veterinary Studies

Research output: Contribution to journal › Article › peer-review

Abstract / Description of output

A systematic review of the literature was carried out to determine the evidence for the reliability and validity of the assessment methods used in veterinary medical education. The review followed the approach used by the Best Evidence Medical Education (BEME) group. This process has established baseline data on published evidence and found that a relatively small number of articles exist relating to assessment specific to veterinary medical education. These articles include a number of general discussion papers, employer observations on graduate competence, and descriptions of methods to assess particular attributes - in particular, clinical skills. However, only five of the papers retrieved in this comprehensive search provide evidence relating to evaluation of the assessment method itself. There is a need for more research on assessment of clinical competence in veterinary medical education.

Original language	English
Pages (from-to)	e6524
Journal	PLoS ONE
Volume	4
Issue number	8
DOIs	https://doi.org/10.1371/journal.pone.0006524
Publication status	Published - 2009

Keywords / Materials (for Non-textual outputs)

Education, Extension, Information and Training (General) [CC000]
Techniques and Methodology [ZZ900]
Professions
Practice and Service [CC700]
education
evaluation
literature reviews
medical education
medicine
methodology
reviews
techniques
veterinary medicine
medical sciences
methods

Access to Document

10.1371/journal.pone.0006524

Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology
This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
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http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0006524

Cite this

Ramos, A. M., Crooijmans, R. P., Affara, N. A., Amaral, A. J., Archibald, A. L., Beever, J. E., Bendixen, C., Churcher, C., Clark, R., Dehais, P., Hansen, M. S., Hedegaard, J., Hu, Z. L., Kerstens, H. H., Law, A. S., Megens, H. J., Milan, D., Nonneman, D. J., Rohrer, G. A., ... Groenen, M. A. (2009). Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology. PLoS ONE, 4(8), e6524. https://doi.org/10.1371/journal.pone.0006524

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title = "Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology",

abstract = "A systematic review of the literature was carried out to determine the evidence for the reliability and validity of the assessment methods used in veterinary medical education. The review followed the approach used by the Best Evidence Medical Education (BEME) group. This process has established baseline data on published evidence and found that a relatively small number of articles exist relating to assessment specific to veterinary medical education. These articles include a number of general discussion papers, employer observations on graduate competence, and descriptions of methods to assess particular attributes - in particular, clinical skills. However, only five of the papers retrieved in this comprehensive search provide evidence relating to evaluation of the assessment method itself. There is a need for more research on assessment of clinical competence in veterinary medical education.",

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Ramos, AM, Crooijmans, RP, Affara, NA, Amaral, AJ, Archibald, AL, Beever, JE, Bendixen, C, Churcher, C, Clark, R, Dehais, P, Hansen, MS, Hedegaard, J, Hu, ZL, Kerstens, HH, Law, AS, Megens, HJ, Milan, D, Nonneman, DJ, Rohrer, GA, Rothschild, MF, Smith, TP, Schnabel, RD, Van Tassell, CP, Taylor, JF, Wiedmann, RT, Schook, LB & Groenen, MA 2009, 'Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology', PLoS ONE, vol. 4, no. 8, pp. e6524. https://doi.org/10.1371/journal.pone.0006524

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AU - Crooijmans, R. P.

AU - Affara, N. A.

AU - Amaral, A. J.

AU - Archibald, A. L.

AU - Beever, J. E.

AU - Bendixen, C.

AU - Churcher, C.

AU - Clark, R.

AU - Dehais, P.

AU - Hansen, M. S.

AU - Hedegaard, J.

AU - Hu, Z. L.

AU - Kerstens, H. H.

AU - Law, A. S.

AU - Megens, H. J.

AU - Milan, D.

AU - Nonneman, D. J.

AU - Rohrer, G. A.

AU - Rothschild, M. F.

AU - Smith, T. P.

AU - Schnabel, R. D.

AU - Van Tassell, C. P.

AU - Taylor, J. F.

AU - Wiedmann, R. T.

AU - Schook, L. B.

AU - Groenen, M. A.

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KW - evaluation

KW - literature reviews

KW - medical education

KW - medicine

KW - methodology

KW - reviews

KW - techniques

KW - veterinary medicine

KW - medical sciences

KW - methods

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U2 - 10.1371/journal.pone.0006524

DO - 10.1371/journal.pone.0006524

M3 - Article

SN - 1932-6203

VL - 4

SP - e6524

JO - PLoS ONE

JF - PLoS ONE

IS - 8

ER -

Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

Abstract / Description of output

Keywords / Materials (for Non-textual outputs)

Access to Document

Other files and links

Fingerprint

Pig genome annotation and analysis

Cite this

Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

Abstract / Description of output

Keywords / Materials (for Non-textual outputs)

Access to Document

Other files and links

Fingerprint

Projects

Pig genome annotation and analysis

Cite this