Ecotoxicology data federation with SADI semantic web services

Alexandre Riazanov; Matthew M. Hindle; E. Scott Goudreau; Christopher J. Martyniuk; Christopher J.O. Baker

Ecotoxicology data federation with SADI semantic web services

Alexandre Riazanov^*, Matthew M. Hindle, E. Scott Goudreau, Christopher J. Martyniuk, Christopher J.O. Baker

^*Corresponding author for this work

Research output: Contribution to journal › Conference article › peer-review

Abstract

Biologists and biotechnologists need to draw information from numerous distributed and heterogeneous resources, such as online biomedical databases, nomenclatures and specialised bioinformatics tools. These tasks can benefit significantly from semantic data federation with SADI Semantic Web services where multiple resources exposed through SADI services are accessed as a single virtual SPARQL-queriable database. We provide evidence in support of this premise by creating and testing a kit of public SADI services for a number of bioinformatics databases and programs, and by demonstrating how it can be used to serve real information needs of ecotoxicology researchers, by using the services to answer some model queries.

Original language	English
Journal	CEUR Workshop Proceedings
Volume	952
Publication status	Published - 1 Jan 2012
Event	5th International Workshop on Semantic Web Applications and Tools for Life Sciences, SWAT4LS 2012 - Paris, France Duration: 28 Nov 2012 → 30 Nov 2012

Cite this

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title = "Ecotoxicology data federation with SADI semantic web services",

abstract = "Biologists and biotechnologists need to draw information from numerous distributed and heterogeneous resources, such as online biomedical databases, nomenclatures and specialised bioinformatics tools. These tasks can benefit significantly from semantic data federation with SADI Semantic Web services where multiple resources exposed through SADI services are accessed as a single virtual SPARQL-queriable database. We provide evidence in support of this premise by creating and testing a kit of public SADI services for a number of bioinformatics databases and programs, and by demonstrating how it can be used to serve real information needs of ecotoxicology researchers, by using the services to answer some model queries.",

author = "Alexandre Riazanov and Hindle, {Matthew M.} and Goudreau, {E. Scott} and Martyniuk, {Christopher J.} and Baker, {Christopher J.O.}",

year = "2012",

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language = "English",

volume = "952",

journal = "CEUR Workshop Proceedings",

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note = "5th International Workshop on Semantic Web Applications and Tools for Life Sciences, SWAT4LS 2012 ; Conference date: 28-11-2012 Through 30-11-2012",

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TY - JOUR

T1 - Ecotoxicology data federation with SADI semantic web services

AU - Riazanov, Alexandre

AU - Hindle, Matthew M.

AU - Goudreau, E. Scott

AU - Martyniuk, Christopher J.

AU - Baker, Christopher J.O.

PY - 2012/1/1

Y1 - 2012/1/1

N2 - Biologists and biotechnologists need to draw information from numerous distributed and heterogeneous resources, such as online biomedical databases, nomenclatures and specialised bioinformatics tools. These tasks can benefit significantly from semantic data federation with SADI Semantic Web services where multiple resources exposed through SADI services are accessed as a single virtual SPARQL-queriable database. We provide evidence in support of this premise by creating and testing a kit of public SADI services for a number of bioinformatics databases and programs, and by demonstrating how it can be used to serve real information needs of ecotoxicology researchers, by using the services to answer some model queries.

AB - Biologists and biotechnologists need to draw information from numerous distributed and heterogeneous resources, such as online biomedical databases, nomenclatures and specialised bioinformatics tools. These tasks can benefit significantly from semantic data federation with SADI Semantic Web services where multiple resources exposed through SADI services are accessed as a single virtual SPARQL-queriable database. We provide evidence in support of this premise by creating and testing a kit of public SADI services for a number of bioinformatics databases and programs, and by demonstrating how it can be used to serve real information needs of ecotoxicology researchers, by using the services to answer some model queries.

UR - http://www.scopus.com/inward/record.url?scp=84898916495&partnerID=8YFLogxK

M3 - Conference article

AN - SCOPUS:84898916495

VL - 952

JO - CEUR Workshop Proceedings

JF - CEUR Workshop Proceedings

SN - 1613-0073

T2 - 5th International Workshop on Semantic Web Applications and Tools for Life Sciences, SWAT4LS 2012

Y2 - 28 November 2012 through 30 November 2012

ER -

Ecotoxicology data federation with SADI semantic web services

Abstract

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