EMAGE: a spatial database of gene expression patterns during mouse embryo development

Jeffrey H Christiansen; Yiya Yang; Shanmugasundaram Venkataraman; Lorna Richardson; Peter Stevenson; Nicholas Burton; Richard A Baldock; Duncan R Davidson

doi:10.1093/nar/gkj006

EMAGE: a spatial database of gene expression patterns during mouse embryo development

Jeffrey H Christiansen, Yiya Yang, Shanmugasundaram Venkataraman, Lorna Richardson, Peter Stevenson, Nicholas Burton, Richard A Baldock, Duncan R Davidson

Research output: Contribution to journal › Article › peer-review

Abstract

EMAGE (http://genex.hgu.mrc.ac.uk/Emage/database) is a freely available, curated database of gene expression patterns generated by in situ techniques in the developing mouse embryo. It is unique in that it contains standardized spatial representations of the sites of gene expression for each gene, denoted against a set of virtual reference embryo models. As such, the data can be interrogated in a novel and abstract manner by using space to define a query. Accompanying the spatial representations of gene expression patterns are text descriptions of the sites of expression, which also allows searching of the data by more conventional text-based methods.

Original language	English
Pages (from-to)	D637-41
Journal	Nucleic Acids Research
Volume	34
Issue number	Database issue
DOIs	https://doi.org/10.1093/nar/gkj006
Publication status	Published - 2006

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10.1093/nar/gkj006

EMAGE a spatial database of gene expression patterns during mouse embryo development
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http://nar.oxfordjournals.org/content/34/suppl_1/D637

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title = "EMAGE: a spatial database of gene expression patterns during mouse embryo development",

abstract = "EMAGE (http://genex.hgu.mrc.ac.uk/Emage/database) is a freely available, curated database of gene expression patterns generated by in situ techniques in the developing mouse embryo. It is unique in that it contains standardized spatial representations of the sites of gene expression for each gene, denoted against a set of virtual reference embryo models. As such, the data can be interrogated in a novel and abstract manner by using space to define a query. Accompanying the spatial representations of gene expression patterns are text descriptions of the sites of expression, which also allows searching of the data by more conventional text-based methods.",

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AU - Christiansen, Jeffrey H

AU - Yang, Yiya

AU - Venkataraman, Shanmugasundaram

AU - Richardson, Lorna

AU - Stevenson, Peter

AU - Burton, Nicholas

AU - Baldock, Richard A

AU - Davidson, Duncan R

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N2 - EMAGE (http://genex.hgu.mrc.ac.uk/Emage/database) is a freely available, curated database of gene expression patterns generated by in situ techniques in the developing mouse embryo. It is unique in that it contains standardized spatial representations of the sites of gene expression for each gene, denoted against a set of virtual reference embryo models. As such, the data can be interrogated in a novel and abstract manner by using space to define a query. Accompanying the spatial representations of gene expression patterns are text descriptions of the sites of expression, which also allows searching of the data by more conventional text-based methods.

AB - EMAGE (http://genex.hgu.mrc.ac.uk/Emage/database) is a freely available, curated database of gene expression patterns generated by in situ techniques in the developing mouse embryo. It is unique in that it contains standardized spatial representations of the sites of gene expression for each gene, denoted against a set of virtual reference embryo models. As such, the data can be interrogated in a novel and abstract manner by using space to define a query. Accompanying the spatial representations of gene expression patterns are text descriptions of the sites of expression, which also allows searching of the data by more conventional text-based methods.

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DO - 10.1093/nar/gkj006

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JF - Nucleic Acids Research

SN - 0305-1048

IS - Database issue

ER -

EMAGE: a spatial database of gene expression patterns during mouse embryo development

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