Generation and applications of simulated datasets to integrate social network and demographic analyses

Matthew J. Silk*, Olivier Gimenez

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

Social networks are tied to population dynamics; interactions are driven by population density and demographic structure, while social relationships can be key determinants of survival and reproductive success. However, difficulties integrating models used in demography and network analysis have limited research at this interface. We introduce the R package genNetDem for simulating integrated network–demographic datasets. It can be used to create longitudinal social network and/or capture–recapture datasets with known properties. It incorporates the ability to generate populations and their social networks, generate grouping events using these networks, simulate social network effects on individual survival, and flexibly sample these longitudinal datasets of social associations. By generating co- capture data with known statistical relationships, it provides functionality for methodological research. We demonstrate its use with case studies testing how imputation and sampling design influence the success of adding network traits to conventional Cormack–Jolly– Seber (CJS) models. We show that incorporating social network effects into CJS models generates qualitatively accurate results, but with downward- biased parameter estimates when network position influences survival. Biases are greater when fewer interactions are sampled or fewer individuals observed in each interaction. While our results indicate the potential of incorporating social effects within demographic models, they show that imputing missing network measures alone is insufficient to accurately estimate social effects on survival, pointing to the importance of incorporating network imputation approaches. genNetDem provides a flexible tool to aid these methodological advancements and help researchers testing other sampling considerations in social network studies.
Original languageEnglish
Article numbere9871
Number of pages16
JournalEcology and Evolution
Volume13
Issue number5
DOIs
Publication statusPublished - 15 May 2023
Externally publishedYes

Keywords / Materials (for Non-textual outputs)

  • co-capture data
  • hidden Markov model
  • population dynamics
  • stochastic block model
  • survival

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