GeneViTo: visualizing gene-product functional and structural features in genomic datasets

Georgios S Vernikos, Christos G Gkogkas, Vasilis J Promponas, Stavros J Hamodrakas

Research output: Contribution to journalArticlepeer-review

Abstract

The availability of increasing amounts of sequence data from completely sequenced genomes boosts the development of new computational methods for automated genome annotation and comparative genomics. Therefore, there is a need for tools that facilitate the visualization of raw data and results produced by bioinformatics analysis, providing new means for interactive genome exploration. Visual inspection can be used as a basis to assess the quality of various analysis algorithms and to aid in-depth genomic studies.
Original languageEnglish
Pages (from-to)53
JournalBMC Bioinformatics
Volume4
DOIs
Publication statusPublished - 31 Oct 2003

Keywords

  • Bacterial Proton-Translocating ATPases
  • Base Sequence
  • Binding Sites
  • Chlamydia trachomatis
  • Chromosome Mapping
  • Chromosomes, Bacterial
  • Computational Biology
  • Computer Graphics
  • DNA Restriction Enzymes
  • Databases, Genetic
  • Genes, Bacterial
  • Genes, rRNA
  • Genome, Bacterial
  • Methanococcus
  • Molecular Sequence Data
  • Phylogeny
  • Protein Subunits
  • RNA, Bacterial
  • RNA, Transfer
  • Software
  • User-Computer Interface

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