Intrinsic disorder in proteins: a challenge for (un)structural biology met by ion mobility-mass spectrometry

Ewa Jurneczko, Faye Cruickshank, Massimiliano Porrini, Penka Nikolova, Iain D. G. Campuzano, Michael Morris, Perdita E. Barran

Research output: Contribution to journalArticlepeer-review

Abstract

The link between structure and function of a given protein is a principal tenet of biology. The established approach to understand the function of a protein is to 'solve' its structure and subsequently investigate interactions between the protein and its binding partners. However, structure determination via crystallography or NMR is challenging for proteins where localized regions or even their entire structure fail to fold into a three-dimensional form. These so called IDPs (intrinsically disordered proteins) or intrinsically disordered regions constitute up to 40% of all expressed proteins, and a much higher percentage in proteins involved in the proliferation of cancer. For these proteins, there is a need to develop new methods for structural characterization which exploit their biophysical properties. IM (ion mobility)-MS is uniquely able to examine both absolute conformation(s), populations of conformation and also conformational change, and is therefore highly applicable to the study of IDPs. The present article details the technique of IM-MS and illustrates its use in assessing the relative disorder of the wild-type p53 DNA-core-binding domain of cellular tumour antigen p53. The IM data were acquired on a Waters Synapt HDMS instrument following nESI (nanoelectrospray ionization) from 'native' and low-pH solution conditions.

Original languageEnglish
Pages (from-to)1021-1026
Number of pages6
JournalBiochemical Society Transactions
Volume40
Issue number5
DOIs
Publication statusPublished - Oct 2012

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