Linkage maps of the Atlantic salmon (Salmo salar) genome derived from RAD sequencing

Serap Gonen, Natalie R Lowe, Timothé Cezard, Karim Gharbi, Stephen C Bishop, Ross D Houston

Research output: Contribution to journalArticlepeer-review

Abstract

Genetic linkage maps are useful tools for mapping quantitative trait loci (QTL) influencing variation in traits of interest in a population. Genotyping-by-sequencing approaches such as Restriction-site Associated DNA sequencing (RAD-Seq) now enable the rapid discovery and genotyping of genome-wide SNP markers suitable for the development of dense SNP linkage maps, including in non-model organisms such as Atlantic salmon (Salmo salar). This paper describes the development and characterisation of a high density SNP linkage map based on SbfI RAD-Seq SNP markers from two Atlantic salmon reference families.
Original languageEnglish
Article number166
Pages (from-to)166
Number of pages1
JournalBMC Genomics
Volume15
Issue number1
DOIs
Publication statusPublished - 27 Feb 2014

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