Projects per year
Abstract
Biological systems are often modelled at different levels of abstraction depending on the particular aims/resources of a study. Such different models often provide qualitatively concordant predictions over specific parametrisations, but it is generally unclear whether model predictions are quantitatively in agreement, and whether such agreement holds for different parametrisations. Here we present a generally applicable statistical machine learning methodology to automatically reconcile the predictions of different models across abstraction levels. Our approach is based on defining a correction map, a random function which modifies the output of a model in order to match the statistics of the output of a different model of the same system. We use two biological examples to give a proof-of-principle demonstration of the methodology, and discuss its advantages and potential further applications.
Original language | English |
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Title of host publication | Computational Methods in Systems Biology |
Subtitle of host publication | 14th International Conference, CMSB 2016, Cambridge, UK, September 21-23, 2016, Proceedings |
Editors | Ezio Bartocci, Pietro Lio, Nicola Paoletti |
Place of Publication | Cham |
Publisher | Springer |
Pages | 49-66 |
Number of pages | 18 |
ISBN (Electronic) | 978-3-319-45177-0 |
ISBN (Print) | 978-3-319-45176-3 |
DOIs | |
Publication status | Published - 4 Sept 2016 |
Event | 14th International Conference on Computational Methods in Systems Biology - Cambridge, United Kingdom Duration: 21 Sept 2016 → 23 Sept 2016 http://www.cl.cam.ac.uk/events/cmsb2016/ |
Publication series
Name | Lecture Notes in Computer Science |
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Publisher | Springer International Publishing |
Volume | 9859 |
ISSN (Print) | 0302-9743 |
Conference
Conference | 14th International Conference on Computational Methods in Systems Biology |
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Abbreviated title | CMSB 2016 |
Country/Territory | United Kingdom |
City | Cambridge |
Period | 21/09/16 → 23/09/16 |
Internet address |
Fingerprint
Dive into the research topics of 'Matching Models Across Abstraction Levels with Gaussian Processes'. Together they form a unique fingerprint.Projects
- 2 Finished
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QUANTICOL - A Quantitative Approach to Management and Design of Collective and Adaptive Behaviours (RTD)
1/04/13 → 31/03/17
Project: Research
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MLCS - Machine learning for computational science statistical and formal modeling of biological systems
Sanguinetti, G.
1/10/12 → 30/09/17
Project: Research