Phase Behavior of a Lattice Hydrophobic Oligomer in Explicit Water

Santiago Romero-Vargas Castrillon, Silvina Matysiak, Frank H. Stillinger, Peter J. Rossky, Pablo G. Debenedetti

Research output: Contribution to journalArticlepeer-review

Abstract / Description of output

We investigate the thermodynamics of hydrophobic oligomer collapse using a water-explicit, three-dimensional lattice model. The model captures several aspects of protein thermodynamics, including the emergence of cold- and thermal-unfolding, as well as unfolding at high solvent density (a phenomenon akin to pressure-induced denaturation). We show that over a range of conditions spanning a ≈14% increase in solvent density, the oligomer transforms into a compact, strongly water-penetrated conformation at low temperature. This contrasts with thermal unfolding at high temperature, where the system “denatures” into an extended random coil conformation. We report a phase diagram for hydrophobic collapse that correctly captures qualitative aspects of cold and thermal unfolding at low to intermediate solvent densities.
Original languageEnglish
Pages (from-to)9540-9548
JournalJournal of Physical Chemistry B (Soft Condensed Matter and Biophysical Chemistry)
Volume116
Issue number31
DOIs
Publication statusPublished - 23 Jul 2012

Keywords / Materials (for Non-textual outputs)

  • Hydrophobicity
  • Molecules
  • Lattices
  • Oligomers
  • Peptides and proteins

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