RKappa is a framework for the development, simulation, and analysis of rule-based models within the mature statistically empowered R environment. It is designed for model editing, parameter identification, simulation, sensitivity analysis, and visualization. The framework is optimized for high-performance computing platforms and facilitates analysis of large-scale systems biology models where knowledge of exact mechanisms is limited and parameter values are uncertain.
|Title of host publication||Modeling Biomolecular Site Dynamics: Methods and Protocols|
|Editors||William S. Hlavacek|
|Place of Publication||New York, NY|
|Publisher||Springer New York LLC|
|Number of pages||28|
|Publication status||Published - 2019|