Abstract / Description of output
In this release: Improvements to species read assignment logic gives better precision and recall. Added --delete-intermediate option to delete intermediate BAM files. Added --star-executable option to allow different versions of STAR to be used. Added --sambamba-sort-tmp-dir option to specify a different temporary directory for 'sambamba sort'.
| Original language | English |
|---|---|
| Type | A Python tool to disambiguate mixed-species RNA-seq reads according to their species of origin |
| DOIs | |
| Publication status | Published - 16 Feb 2018 |