The genome sequence of the drosophilid fruit fly, Drosophila phalerata (Meigen, 1830)

Darren J. Obbard; Darwin Tree of Life Consortium; Darwin Tree of Life Barcoding collective; Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team; Wellcome Sanger Institute Scientific Operations: Sequencing Operations; Wellcome Sanger Institute Tree of Life Core Informatics team; Tree of Life Core Informatics collective

doi:10.12688/wellcomeopenres.20634.1

The genome sequence of the drosophilid fruit fly, Drosophila phalerata (Meigen, 1830)

Darren J. Obbard
, Darwin Tree of Life Consortium
, Darwin Tree of Life Barcoding collective
, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team
, Wellcome Sanger Institute Scientific Operations: Sequencing Operations
, Wellcome Sanger Institute Tree of Life Core Informatics team
, Tree of Life Core Informatics collective

School of Biological Sciences

Research output: Contribution to journal › Letter › peer-review

Abstract

We present a genome assembly from an individual male Drosophila phalerata (drosophilid fruit fly, Arthropoda; Insecta; Diptera; Drosophilidae). The genome sequence is 223.9 megabases in span. Most of the assembly is scaffolded into 7 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 16.14 kilobases in length. Gene annotation of this assembly on Ensembl identified 18,973 protein coding genes.

Original language	English
Number of pages	14
Journal	Wellcome Open Research
Volume	9
Issue number	63
Early online date	19 Feb 2024
DOIs	https://doi.org/10.12688/wellcomeopenres.20634.1
Publication status	E-pub ahead of print - 19 Feb 2024

Keywords / Materials (for Non-textual outputs)

Drosophila phalerata
drosophilid fruit fly
genome sequence
chromosomal
Diptera

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10.12688/wellcomeopenres.20634.1Licence: Creative Commons: Attribution (CC-BY)

90ea351d-f1ad-4679-9936-bf69a6c06b91_20634_-_tree_of_life_team_sangerFinal published version, 2.86 MBLicence: Creative Commons: Attribution (CC-BY)

Cite this

Obbard, D. J., Darwin Tree of Life Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics team, & Tree of Life Core Informatics collective (2024). The genome sequence of the drosophilid fruit fly, Drosophila phalerata (Meigen, 1830). Wellcome Open Research, 9(63). Advance online publication. https://doi.org/10.12688/wellcomeopenres.20634.1

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keywords = "Drosophila phalerata, drosophilid fruit fly, genome sequence, chromosomal, Diptera",

author = "Obbard, \{Darren J.\} and \{Darwin Tree of Life Consortium\} and \{Darwin Tree of Life Barcoding collective\} and \{Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team\} and \{Wellcome Sanger Institute Scientific Operations: Sequencing Operations\} and \{Wellcome Sanger Institute Tree of Life Core Informatics team\} and \{Tree of Life Core Informatics collective\}",

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Obbard, DJ, Darwin Tree of Life Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics team & Tree of Life Core Informatics collective 2024, 'The genome sequence of the drosophilid fruit fly, Drosophila phalerata (Meigen, 1830)', Wellcome Open Research, vol. 9, no. 63. https://doi.org/10.12688/wellcomeopenres.20634.1

TY - JOUR

T1 - The genome sequence of the drosophilid fruit fly, Drosophila phalerata (Meigen, 1830)

AU - Obbard, Darren J.

AU - Darwin Tree of Life Consortium

AU - Darwin Tree of Life Barcoding collective

AU - Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team

AU - Wellcome Sanger Institute Scientific Operations: Sequencing Operations

AU - Wellcome Sanger Institute Tree of Life Core Informatics team

AU - Tree of Life Core Informatics collective

PY - 2024/2/19

Y1 - 2024/2/19

N2 - We present a genome assembly from an individual male Drosophila phalerata (drosophilid fruit fly, Arthropoda; Insecta; Diptera; Drosophilidae). The genome sequence is 223.9 megabases in span. Most of the assembly is scaffolded into 7 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 16.14 kilobases in length. Gene annotation of this assembly on Ensembl identified 18,973 protein coding genes.

AB - We present a genome assembly from an individual male Drosophila phalerata (drosophilid fruit fly, Arthropoda; Insecta; Diptera; Drosophilidae). The genome sequence is 223.9 megabases in span. Most of the assembly is scaffolded into 7 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 16.14 kilobases in length. Gene annotation of this assembly on Ensembl identified 18,973 protein coding genes.

KW - Drosophila phalerata

KW - drosophilid fruit fly

KW - genome sequence

KW - chromosomal

KW - Diptera

UR - https://www.ebi.ac.uk/ena/browser/view/PRJEB57266

U2 - 10.12688/wellcomeopenres.20634.1

DO - 10.12688/wellcomeopenres.20634.1

M3 - Letter

SN - 2398-502X

VL - 9

JO - Wellcome Open Research

JF - Wellcome Open Research

IS - 63

ER -

Obbard DJ, Darwin Tree of Life Consortium, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team, Wellcome Sanger Institute Scientific Operations: Sequencing Operations, Wellcome Sanger Institute Tree of Life Core Informatics team et al. The genome sequence of the drosophilid fruit fly, Drosophila phalerata (Meigen, 1830). Wellcome Open Research. 2024 Feb 19;9(63). Epub 2024 Feb 19. doi: 10.12688/wellcomeopenres.20634.1

The genome sequence of the drosophilid fruit fly, Drosophila phalerata (Meigen, 1830)

Abstract

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Darwin Tree of Life

An integrated approach to genome evolution using the Drosophila model

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The genome sequence of the drosophilid fruit fly, Drosophila phalerata (Meigen, 1830)

Abstract

Keywords / Materials (for Non-textual outputs)

Access to Document

Other files and links

Fingerprint

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Darwin Tree of Life

An integrated approach to genome evolution using the Drosophila model

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