The Impact of Annotation on the Performance of Protein Tagging in Biomedical Text

Beatrice Alex, Malvina Nissim, Claire Grover

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract / Description of output

In this paper we discuss five different corpora annotated forprotein names. We present several within- and cross-dataset proteintagging experiments showing that different annotation schemes severelyaffect the portability of statistical protein taggers. By means of adetailed error analysis we identify crucial annotation issues thatfuture annotation projects should take into careful consideration.
Original languageEnglish
Title of host publicationProceedings of the 5th International Conference on Language Resources and Evaluation (LREC 2006)
Number of pages6
Publication statusPublished - 2006

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