Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities

Igor Goryanin.; Anatoly Sorokin.; Olga Vasieva.

doi:10.5220/0009193602530259

Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities

Igor Goryanin., Anatoly Sorokin., Olga Vasieva.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract / Description of output

In this paper we describe applications of our ASAR package to functional, taxonomic and pathways analysis of metagenomes and propose future plans and perspectives. To illustrate an analytical potential of ASAR, we discuss outcomes of several projects. The main focus is made on metabolic plasticity of electrochemically active microbial communities and a potential role of integrated symbiotic bacterial interactions; antipathogenic properties of BES, manifested in its capacity to remove some pathogens from waste streams; and medical applications of this technology. We present ASAR-based metagenome analysis of evolving bacterial community from distillery waste over period of 36 months in BES environment as an example. Application of ASAR to personalised analyses of gut microbiome (GM) and the data interpretation based on publically available association studies are also discussed in this publication.

Original language	English
Title of host publication	Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies - BIOINFORMATICS,
Publisher	SCITEPRESS
Pages	253-259
Number of pages	7
Volume	3
ISBN (Print)	978-989-758-398-8
DOIs	https://doi.org/10.5220/0009193602530259
Publication status	Published - 24 Feb 2020
Event	13th International Joint Conference on Biomedical Engineering Systems and Technologies - Valletta, Malta Duration: 24 Feb 2020 → 26 Feb 2020 http://www.biostec.org

Publication series

Name
ISSN (Electronic)	2184-4305

Conference

Conference	13th International Joint Conference on Biomedical Engineering Systems and Technologies
Abbreviated title	BIOSTEC 2020
Country/Territory	Malta
City	Valletta
Period	24/02/20 → 26/02/20
Internet address	http://www.biostec.org

Keywords / Materials (for Non-textual outputs)

metagenome analysis
pathogens
human microbiome
bioelectrical systems

Access to Document

10.5220/0009193602530259Licence: Creative Commons: Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND)

Using ASAR for Analysis_GORYANIN_DOA20122019_VOR_CC-BY-NC-NDFinal published version, 0.98 MBLicence: Creative Commons: Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND)

Cite this

@inproceedings{339bcde3da7840638d1721bb02f96b6b,

title = "Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities",

abstract = "In this paper we describe applications of our ASAR package to functional, taxonomic and pathways analysis of metagenomes and propose future plans and perspectives. To illustrate an analytical potential of ASAR, we discuss outcomes of several projects. The main focus is made on metabolic plasticity of electrochemically active microbial communities and a potential role of integrated symbiotic bacterial interactions; antipathogenic properties of BES, manifested in its capacity to remove some pathogens from waste streams; and medical applications of this technology. We present ASAR-based metagenome analysis of evolving bacterial community from distillery waste over period of 36 months in BES environment as an example. Application of ASAR to personalised analyses of gut microbiome (GM) and the data interpretation based on publically available association studies are also discussed in this publication.",

keywords = "metagenome analysis, pathogens, human microbiome, bioelectrical systems",

author = "Igor Goryanin. and Anatoly Sorokin. and Olga Vasieva.",

year = "2020",

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doi = "10.5220/0009193602530259",

language = "English",

isbn = "978-989-758-398-8",

volume = "3",

publisher = "SCITEPRESS",

pages = "253--259",

booktitle = "Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies - BIOINFORMATICS,",

note = "13th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2020 ; Conference date: 24-02-2020 Through 26-02-2020",

url = "http://www.biostec.org",

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Goryanin., I, Sorokin., A & Vasieva., O 2020, Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities. in Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies - BIOINFORMATICS,. vol. 3, SCITEPRESS, pp. 253-259, 13th International Joint Conference on Biomedical Engineering Systems and Technologies, Valletta, Malta, 24/02/20. https://doi.org/10.5220/0009193602530259

Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities. / Goryanin., Igor; Sorokin., Anatoly; Vasieva., Olga.
Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies - BIOINFORMATICS,. Vol. 3 SCITEPRESS, 2020. p. 253-259.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

TY - GEN

T1 - Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities

AU - Goryanin., Igor

AU - Sorokin., Anatoly

AU - Vasieva., Olga

PY - 2020/2/24

Y1 - 2020/2/24

N2 - In this paper we describe applications of our ASAR package to functional, taxonomic and pathways analysis of metagenomes and propose future plans and perspectives. To illustrate an analytical potential of ASAR, we discuss outcomes of several projects. The main focus is made on metabolic plasticity of electrochemically active microbial communities and a potential role of integrated symbiotic bacterial interactions; antipathogenic properties of BES, manifested in its capacity to remove some pathogens from waste streams; and medical applications of this technology. We present ASAR-based metagenome analysis of evolving bacterial community from distillery waste over period of 36 months in BES environment as an example. Application of ASAR to personalised analyses of gut microbiome (GM) and the data interpretation based on publically available association studies are also discussed in this publication.

AB - In this paper we describe applications of our ASAR package to functional, taxonomic and pathways analysis of metagenomes and propose future plans and perspectives. To illustrate an analytical potential of ASAR, we discuss outcomes of several projects. The main focus is made on metabolic plasticity of electrochemically active microbial communities and a potential role of integrated symbiotic bacterial interactions; antipathogenic properties of BES, manifested in its capacity to remove some pathogens from waste streams; and medical applications of this technology. We present ASAR-based metagenome analysis of evolving bacterial community from distillery waste over period of 36 months in BES environment as an example. Application of ASAR to personalised analyses of gut microbiome (GM) and the data interpretation based on publically available association studies are also discussed in this publication.

KW - metagenome analysis

KW - pathogens

KW - human microbiome

KW - bioelectrical systems

U2 - 10.5220/0009193602530259

DO - 10.5220/0009193602530259

M3 - Conference contribution

SN - 978-989-758-398-8

VL - 3

SP - 253

EP - 259

BT - Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies - BIOINFORMATICS,

PB - SCITEPRESS

T2 - 13th International Joint Conference on Biomedical Engineering Systems and Technologies

Y2 - 24 February 2020 through 26 February 2020

ER -

Using ASAR for Analysis of Electrogenic and Human Gut Microbial Communities

Abstract / Description of output

Publication series

Conference

Keywords / Materials (for Non-textual outputs)

Access to Document

Fingerprint

Cite this