@article{294b3fd0993e469a832e94d0511075a2,
title = "Whole-genome resource sequences of 57 indigenous Ethiopian goats",
abstract = "Domestic goats are distributed worldwide, with approximately 35\% of the one billion world goat population occurring in Africa. Ethiopia has 52.5 million goats, \textasciitilde{}99.9\% of which are considered indigenous landraces deriving from animals introduced to the Horn of Africa in the distant past by nomadic herders. They have continued to be managed by smallholder farmers and semi-mobile pastoralists throughout the region. We report here 57 goat genomes from 12 Ethiopian goat populations sampled from different agro-climates. The data were generated through sequencing DNA samples on the Illumina NovaSeq 6000 platform at a mean depth of 9.71x and 150 bp pair-end reads. In total, \textasciitilde{}2 terabytes of raw data were generated, and 99.8\% of the clean reads mapped successfully against the goat reference genome assembly at a coverage of 99.6\%. About 24.76 million SNPs were generated. These SNPs can be used to study the population structure and genome dynamics of goats at the country, regional, and global levels to shed light on the species' evolutionary trajectory.",
keywords = "Animals, Biological Evolution, DNA, Ethiopia, Genome, Goats/genetics",
author = "Shumuye Belay and Gurja Belay and Helen Nigussie and Han Jian-Lin and Abdulfatai Tijjani and Ahbara, \{Abulgasim M\} and Tarekegn, \{Getinet M\} and Woldekiros, \{Helina S\} and Siobhan Mor and Keith Dobney and Ophelie Lebrasseur and Olivier Hanotte and Mwacharo, \{Joram M\}",
note = "Funding Information: The authors would like to thank the flock owners who provided their animals for sampling and extension workers for their assistance in sample collection, Gebreslassie Gebru for his technical support and Prof. Baylis Matthew and the other HORN project staff for their financial and facilitation work. We also thank the University of Liverpool, Global Challenges Research Fund (GCRF) One Health Regional Network for the Horn of Africa (HORN) Project funded by the UK Research and Innovation (UKRI) and Biotechnology and Biological Sciences Research Council (BBSRC) (project number BB/P027954/1); the BecA-ILRI Hub through the Africa Biosciences Challenge Fund (ABCF) Program; Tigray Agricultural Research Institute (TARI); Addis Ababa University, Department of Microbial Cellular and Molecular Biology, and the CGIAR Research Program on Livestock (Livestock CRP) and its successor SAPLING Initiative through the International Centre for Agricultural Research in the Dry Areas (ICARDA) and International Livestock Research Institute (ILRI), for financial and logistical support. Publisher Copyright: {\textcopyright} 2024, The Author(s).",
year = "2024",
month = jan,
day = "29",
doi = "10.1038/s41597-024-02973-2",
language = "English",
volume = "11",
pages = "1--11",
journal = "Scientific Data",
issn = "2052-4463",
publisher = "Macmillan Publishers",
number = "1",
}